| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5175 |
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| Symbol | |
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| ID | 5872990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5787009 |
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| End bp | 5787821 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641550313 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001671395 |
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| Protein GI | 167036164 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAAT TGCCAGAAGT AGAAACCACC CGGCGCGGTA TCGCACCGCA CCTGGAAGGC
CAACGCGTCA GCCGTGTGGT GGTGCGTGAC CGGCGCCTGC GCTGGCCGAT TCCGGAAGAC
CTCGATGTGC GCCTGTCAGG GCAGCGTATC GTCAGCGTCG AACGACGCGC CAAGTACCTG
TTGATCAATG CCGAGGTCGG TACGCTGATC AGCCACCTGG GCATGTCGGG CAACCTGCGT
CTGGTCGAGT TGGGCTTGCC GGCGGCCAAG CATGAGCACG TCGACATCGA GCTGGAGTCG
GGGCTGATGC TGCGCTACAC CGACCCGCGC CGCTTTGGTG CCATGTTGTG GAGCCTGGAC
CCGCTCAACC ACGAACTGCT GCTGCGCCTG GGGCCGGAGC CGCTGACCGA CCTGTTCGAC
GGTGAGCGCC TGTTCCAGCT GTCCCGCGGG CGATCGATGG CGGTCAAACC GTTCATCATG
GACAACGCGG TGGTGGTGGG GGTGGGCAAC ATCTACGCCA CCGAGGCACT GTTCGCTGCG
GGTATCGACC CACGTCGGGA GGCGGGCGGG ATTTCCCGCG CGCGCTATTT GAAGCTGGCG
ATCGAGATCA AGCGGGTGCT GGCGGCGGCA ATCGAGCAGG GCGGTACTAC CCTGCGCGAC
TTTATCGGTG GCGATGGGCA GCCGGGGTAC TTCCAGCAGG AATTGTTCGT CTACGGGCGG
GGCGGGCAGC CGTGCAAGGT GTGCGGCACG GCGCTGCGCG AGGTGAAGCT GGGGCAACGG
GCGAGCGTGT ACTGCCCGCG CTGCCAGCGC TAA
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| Protein sequence | MPELPEVETT RRGIAPHLEG QRVSRVVVRD RRLRWPIPED LDVRLSGQRI VSVERRAKYL
LINAEVGTLI SHLGMSGNLR LVELGLPAAK HEHVDIELES GLMLRYTDPR RFGAMLWSLD
PLNHELLLRL GPEPLTDLFD GERLFQLSRG RSMAVKPFIM DNAVVVGVGN IYATEALFAA
GIDPRREAGG ISRARYLKLA IEIKRVLAAA IEQGGTTLRD FIGGDGQPGY FQQELFVYGR
GGQPCKVCGT ALREVKLGQR ASVYCPRCQR
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