| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5172 |
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| Symbol | |
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| ID | 5872987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5784311 |
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| End bp | 5785909 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641550310 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001671392 |
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| Protein GI | 167036161 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGTAC CCGACCCGTT TCGCCAAGGC CTCGAACGCG GCTGGATCAC CCACGACGCC
TCACGCCTGG AGCACGATCT GAGCCTGGAG GCCGACATTG CCGTGATCGG CAGTGGCGCC
GGTGGTGCCA CCAGCGCGCA GATGCTCAGT GCTGCCGGTT TCAAGGTACT GCTGATCGAA
GAAGGCCCGC TGAAGACCAG CAGCGATTTC CACCTGCTGG AGAGCGAAGC CTACGCCAGC
CTGTACCAGG AAGGCCTGGG GCGCATGAGC AAGGATGGCG CCATTACCAT CCTGCAGGGC
CGCGCCGTGG GCGGTACCAC ACTGGTGAAC TGGACCTCGA GCTTTCGTAC CCCGCCGCAA
ACCCTGACGC ATTGGGCTTC GGCCCACGGC GTGAGCGGCT TGGGCGAGGA GGAGCTGCGC
CCCTGGTTCG AGCGCATGGA GCAGGAGCTG GGCATAACGC CCTGGGCTTT GCCGCCAAAT
GCCAATAATG ACGTACTGCG CCGTGGCTGC GAACAGCTCG GCTACCGCTG GGCGGTGATC
CCGCGCAATG TGCGCGGTTG CTGGAACCTG GGCTACTGCG GCATGGGCTG CCCGGTAAAC
GCCAAGCAAT CGATGCTGGT AACCCGTATT CCTGCCACCC TCGAGCAAGG CGGTGAGCTG
CTGTACCTGG CCCGGGCCGA GCGTTTCACG CACAACGGAG CGCGCGTCCA GAGCCTGACC
TGCCAGGCCC TGGACGCCCA AGGCATACAG CCCACCGGCA AGCAGGTCAG CGTGCGGGCA
CGCCATTACC TGCTCGCCGG GGGTGGCATC AACAGCCCGG CCCTGCTGCT GCGCTCTGCC
GCGCCCGACC CGCATGGCCG CCTGGGCAAG CGCACCTTCC TGCACCTGGT CAACTTCAGC
GCGGCACGCT TCAGCGAGCG TATCGACCCC TACTATGGCG CCCCGCAGTC GATCTACAGC
GACCACTTCC AGTGGCAAGG CGGTGCGGAC GGCCCGGTTG GCTACAAGCT GGAAGTACCG
CCGCTGCACC CGGCCCTGGC CAGCACCCTG CTGGGCGGGT ACGGCCACGA GAATGCCCAG
CGCATGGCCG AGCTGCCGCA TACCCATGTG ATGCTGGCGC TGCTGCGCGA CGGCTTTCAC
CCCGAAAGCC AAGGTGGGGC GGTGGAACTG CGCGGGGATG GCTCGCCCGT GCTCGATTAC
CCGGTCACCG ACTACCTGCG TGACGGCTTG CGCCGGGCCT ACCGCAGCAT GGCGCAAGTC
CAGTTCGCCG CTGGCGCCAT TCAGGTAACC CCCGTGCACA GCGACGCCAG CGCCGCATCC
AACCTGGAGC AGGCCCTGGC CATGATCGAT ACGCTGCGCC TGGAGCCCTT CCGCACGCGC
CTGGGCAGCG CCCATGTGAT GGGAGGCTGT GCCCTCGGCG AAGACCCGCG CCAGGCGGTG
TGCGACAGCC TGGGCCGTCA TCACCAGCTG GAAAACCTGT CGATTCACGA CGGCTCGCTG
TTCCCCACCA GCATCGGTGC CAACCCACAG CTGTCGGTGT ATGCCATCAG CGCCAAGCTC
AGCGAAGCGC TGGTCGCCCG CCTGGCACAC AGCGCATGA
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| Protein sequence | MPVPDPFRQG LERGWITHDA SRLEHDLSLE ADIAVIGSGA GGATSAQMLS AAGFKVLLIE
EGPLKTSSDF HLLESEAYAS LYQEGLGRMS KDGAITILQG RAVGGTTLVN WTSSFRTPPQ
TLTHWASAHG VSGLGEEELR PWFERMEQEL GITPWALPPN ANNDVLRRGC EQLGYRWAVI
PRNVRGCWNL GYCGMGCPVN AKQSMLVTRI PATLEQGGEL LYLARAERFT HNGARVQSLT
CQALDAQGIQ PTGKQVSVRA RHYLLAGGGI NSPALLLRSA APDPHGRLGK RTFLHLVNFS
AARFSERIDP YYGAPQSIYS DHFQWQGGAD GPVGYKLEVP PLHPALASTL LGGYGHENAQ
RMAELPHTHV MLALLRDGFH PESQGGAVEL RGDGSPVLDY PVTDYLRDGL RRAYRSMAQV
QFAAGAIQVT PVHSDASAAS NLEQALAMID TLRLEPFRTR LGSAHVMGGC ALGEDPRQAV
CDSLGRHHQL ENLSIHDGSL FPTSIGANPQ LSVYAISAKL SEALVARLAH SA
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