Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5168 |
Symbol | |
ID | 5872983 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5780657 |
End bp | 5781511 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641550306 |
Product | rhodanese domain-containing protein |
Protein accession | YP_001671388 |
Protein GI | 167036157 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2897] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCTTG CGCAATTGAT CACCCCGCAG CAGTTGGCCG AGCGTCTGGA CTCGCCCAAG TTGGTGATCC TCGACTGCCG CTTTGCCCTC GAAGATGTGG ACTATGGCCA ACGCAGCTAT GCCCAGGGGC ATATTGCCGG GGCGCATTTT GCCGACCTGG ACCGCGACCT CAGCGGGCCG GTGAGCAAAG GGCGTACCGG GCGCCACCCC TTGCCCGATG CGCAGCGGCT GGTCGCGCGC CTGCGTGAGT GGGGGCTGGA CAATGACAGC GAGGTGGTGC TGTACGACGA CGGCCCTGGC GCTTTTGCTG CCCGTGCGTG GTGGCTGCTG GCCTGGCTGG GCAAGCGCAG TGGTGTGGCG ATCCTCGACG GTGGCTTGAA GGCCTGGCAT GCGGCGCACC TGCCGCTGAG CCTGGACCCT GCGCCCAAGC GTGAAGGCAC CTTCAGTGGT GAACCTGACG CGAAACTGTT GATCGATGCC GAGCACCTGG GCAAGCGCCT GGGCAGTACC GACCTGACCT TGATCGATGC GCGTGCGTTA CCGCGTTTTC GCGGCGAGGT GGAACCGATC GACCCGGTGG CAGGGCATAT TCCCGGGGCC CTGTGCGCAG CGTTTACCGA CAACCTGGGG GCTGATGGGC GCTTTTTGCC GGCGGACCAG CTCAAGCAGC GCTTTGCCGA AAAGCTCGCT GGGCGGGCAC CGGAGCAGTT GGTGTCTTAC TGCGGGTCTG GGGTAACGGC TTGCCATAAC CTGTTTGCGA TGGCATTGGC GGGGTACCCG CTGGGCAAGC TGTACGCCGG GTCGTGGAGC GAGTGGATCA ATGATCCTAA GCATGGTGTA GCCACCGGCG AGTAA
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Protein sequence | MPLAQLITPQ QLAERLDSPK LVILDCRFAL EDVDYGQRSY AQGHIAGAHF ADLDRDLSGP VSKGRTGRHP LPDAQRLVAR LREWGLDNDS EVVLYDDGPG AFAARAWWLL AWLGKRSGVA ILDGGLKAWH AAHLPLSLDP APKREGTFSG EPDAKLLIDA EHLGKRLGST DLTLIDARAL PRFRGEVEPI DPVAGHIPGA LCAAFTDNLG ADGRFLPADQ LKQRFAEKLA GRAPEQLVSY CGSGVTACHN LFAMALAGYP LGKLYAGSWS EWINDPKHGV ATGE
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