| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5168 |
|---|
| Symbol | |
|---|
| ID | 5872983 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5780657 |
|---|
| End bp | 5781511 |
|---|
| Gene Length | 855 bp |
|---|
| Protein Length | 284 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641550306 |
|---|
| Product | rhodanese domain-containing protein |
|---|
| Protein accession | YP_001671388 |
|---|
| Protein GI | 167036157 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2897] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCTTG CGCAATTGAT CACCCCGCAG CAGTTGGCCG AGCGTCTGGA CTCGCCCAAG
TTGGTGATCC TCGACTGCCG CTTTGCCCTC GAAGATGTGG ACTATGGCCA ACGCAGCTAT
GCCCAGGGGC ATATTGCCGG GGCGCATTTT GCCGACCTGG ACCGCGACCT CAGCGGGCCG
GTGAGCAAAG GGCGTACCGG GCGCCACCCC TTGCCCGATG CGCAGCGGCT GGTCGCGCGC
CTGCGTGAGT GGGGGCTGGA CAATGACAGC GAGGTGGTGC TGTACGACGA CGGCCCTGGC
GCTTTTGCTG CCCGTGCGTG GTGGCTGCTG GCCTGGCTGG GCAAGCGCAG TGGTGTGGCG
ATCCTCGACG GTGGCTTGAA GGCCTGGCAT GCGGCGCACC TGCCGCTGAG CCTGGACCCT
GCGCCCAAGC GTGAAGGCAC CTTCAGTGGT GAACCTGACG CGAAACTGTT GATCGATGCC
GAGCACCTGG GCAAGCGCCT GGGCAGTACC GACCTGACCT TGATCGATGC GCGTGCGTTA
CCGCGTTTTC GCGGCGAGGT GGAACCGATC GACCCGGTGG CAGGGCATAT TCCCGGGGCC
CTGTGCGCAG CGTTTACCGA CAACCTGGGG GCTGATGGGC GCTTTTTGCC GGCGGACCAG
CTCAAGCAGC GCTTTGCCGA AAAGCTCGCT GGGCGGGCAC CGGAGCAGTT GGTGTCTTAC
TGCGGGTCTG GGGTAACGGC TTGCCATAAC CTGTTTGCGA TGGCATTGGC GGGGTACCCG
CTGGGCAAGC TGTACGCCGG GTCGTGGAGC GAGTGGATCA ATGATCCTAA GCATGGTGTA
GCCACCGGCG AGTAA
|
|---|
| Protein sequence | MPLAQLITPQ QLAERLDSPK LVILDCRFAL EDVDYGQRSY AQGHIAGAHF ADLDRDLSGP
VSKGRTGRHP LPDAQRLVAR LREWGLDNDS EVVLYDDGPG AFAARAWWLL AWLGKRSGVA
ILDGGLKAWH AAHLPLSLDP APKREGTFSG EPDAKLLIDA EHLGKRLGST DLTLIDARAL
PRFRGEVEPI DPVAGHIPGA LCAAFTDNLG ADGRFLPADQ LKQRFAEKLA GRAPEQLVSY
CGSGVTACHN LFAMALAGYP LGKLYAGSWS EWINDPKHGV ATGE
|
|---|
| |