Gene PputGB1_5128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5128 
SymbolaroB 
ID5872943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5740527 
End bp5741657 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID641550266 
Product3-dehydroquinate synthase 
Protein accessionYP_001671348 
Protein GI167036117 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0337] 3-dehydroquinate synthetase 
TIGRFAM ID[TIGR01357] 3-dehydroquinate synthase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC GCCCAAGTAC ATTGTGGGGA TACATGCAGA CACTAAAGGT CGACCTGGGC 
GAGCGTAGCT ACCCGATCTA CATTGGCGAA GGCCTGCTGG ACCAGCCCGA ACTGCTGGCG
CCGCACATTG CCGGCCGGCA GGTTGCCATC GTTTCCAACG AGACCGTCGC CCCCCTGTAT
CTCGAACGCC TGAGCAAGAC CCTGGGTGCC TACTCGGTAC TGCCGGTGGT GTTGCCCGAT
GGCGAAGCCC ACAAGAATTG GGAAACCCTG CAACTGATTT TCGATGGCTT GCTGACAGCC
CGCCATGATC GTCGCACCAC CGTGGTCGCC CTGGGCGGCG GCGTGATCGG CGACATGGCC
GGCTTCGCTG CCGCTTGCTA CCAGCGCGGT GTCGACTTCA TCCAGGTGCC GACCACCCTG
TTGTCCCAGG TCGACTCTTC GGTGGGCGGC AAGACCGGCA TCAATCACCC GCTGGGCAAG
AACATGGTCG GTGCCTTCTA TCAGCCCAAT GCGGTACTGA TCGATACCAC CAGCCTCAAG
ACCCTGCCCG CGCGCGAACT GTCCGCAGGC CTGGCCGAAG TGATCAAGTA CGGCCTGATT
TGCGACAAAC CGTTCCTCGC CTGGCTCGAA GACAATATGC AGGCCCTGCG CGCCCTTGAC
TCGGCAGCCC TGACCGAGGC CATCCGCCGC TCCTGCGCGG CCAAGGCCGC AGTAGTGGGG
GCCGACGAGC GCGAGTCGGG CGTACGGGCC ACGCTGAACC TGGGGCATAC CTTCGGGCAT
GCCATCGAAA CCCACATGGG CTATGGCGTG TGGTTGCACG GCGAGGCCGT GGCGGCGGGC
ACGGTGATGG CCCTGGAAAT GTCCATGCGT CTTGGCTGGA TCGACCAGGC CGAGCGCGAT
CGCGGTATCC GCCTGTTGCA GGATGCAGGT TTGCCGGTGG TGCCACCACA GGAAATGACC
CCGGCGCATT TCATGGAGCA CATGGCGGTC GACAAGAAGG TGCTCGACGG TCGTCTGCGT
CTGGTGCTGC TGCGCCAGAT GGGCGAGGCC GTAGTGACCG ACGACTATTC GAAAGAGATT
CTACAGGCCA CGCTGTCGGC GGATTACCGC GCGATCGTGG CCCAGCTTTG A
 
Protein sequence
MAPRPSTLWG YMQTLKVDLG ERSYPIYIGE GLLDQPELLA PHIAGRQVAI VSNETVAPLY 
LERLSKTLGA YSVLPVVLPD GEAHKNWETL QLIFDGLLTA RHDRRTTVVA LGGGVIGDMA
GFAAACYQRG VDFIQVPTTL LSQVDSSVGG KTGINHPLGK NMVGAFYQPN AVLIDTTSLK
TLPARELSAG LAEVIKYGLI CDKPFLAWLE DNMQALRALD SAALTEAIRR SCAAKAAVVG
ADERESGVRA TLNLGHTFGH AIETHMGYGV WLHGEAVAAG TVMALEMSMR LGWIDQAERD
RGIRLLQDAG LPVVPPQEMT PAHFMEHMAV DKKVLDGRLR LVLLRQMGEA VVTDDYSKEI
LQATLSADYR AIVAQL