Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5116 |
Symbol | |
ID | 5872931 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5720668 |
End bp | 5722410 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550254 |
Product | potassium/proton antiporter |
Protein accession | YP_001671336 |
Protein GI | 167036105 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3263] NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGATGCAA GCACCATCAA CAGCCTGTTC CTGATCGGCG CATTGCTGGT GGGCGCAAGT ATCCTGGTCA GTTCGCTGTC GTCGCGCCTG GGTATCCCTA TTCTGGTCAT CATCCTCGCG GTCGGCATGG TCGCCGGTGT CGATGGTGGC GGCATCATCT TCAACAACTA CCCAACCGCC TACCTGGTGG GCAACCTGGC ACTGGCCGTG ATCCTGCTTG ACGGCGGCCT GCGCACGCGG GTGGCAAGCT TCCGCGTGGC ACTGTGGCCG GCGTTGTCGC TGGCCACGGT CGGGGTGATG ATCACCACCG CCCTCACCGG CCTAGTTGCC GCCTGGCTGT TCAACCTGAG CTTGATCCAG GGCCTGCTGA TCGGCGCCAT CGTTGGCTCC ACCGACGCCG CTGCGGTGTT CTCGCTGCTG GGCGGCAAAG GCCTGAATGA GCGGGTTACC GCCACCCTGG AGATCGAGTC GGGCAGCAAC GACCCGATGG CGGTATTCCT CACCGTTACC CTGATCGACA TGATCGCCAG CGGCCAGACC GGCCTGCACT GGAGCCTGCT GGGCCACTTG CTGCGCGAGT TCGGCATCGG CGGGCTGTTG GGCCTGGGCG GCGGCTGGCT GATGCTGCAA CTGGTCAACC GCATCAACCT GGCCGGCGGC CTGTACCCGA TTCTGGTCGT GGCCGGCGGC CTGGTGGTGT TCTCGCTGAC CAACGCCTTG CACGGCAGCG GCTTCCTCGC CGTGTACCTG TGCGGCCTGG TGCTGGGCAA CAAGCCAATT CGCAGCCGCC ACGGCATTCT GCACATGCTC GACGGCATGG CCTGGCTGGC CCAGATCGGT ATGTTCCTGG TGCTGGGGCT GCTGGTTACC CCGCACGACC TGCTGCCCAT TGCCCTGCCG GCATTGGGCC TGGCGCTGTG GATGATCCTG GTGGCGCGGC CACTGTCGGT GGTCGCTGCA CTGCTGCCGT TCAAGGCCTT CCATGGCCGC GAAAAGGGCT TTATTTCCTG GGTTGGCCTG CGCGGCGCGG TGCCGATCAT TCTGGCGGTG TTCCCGCTGA TGGCCGGCCT GCCGGACGCC CAGCTGTTCT TCAACCTGGC ATTCTTCATC GTGCTGGTGT CACTGCTGGT ACAAGGCACC AGCCTGCCGT GGATGGCCAA GCTGCTGAAA GTGACCGTAC CACCAGACCC GGCACCGATC TCCCGCTCCG CCCTGGAAGT GCACGTCACC AGCGAATGGG AGCTGTTCGT GTACCGTCTG GGCGCCGAAA AATGGTGTAT CGGGGCCGCC CTGCGCGAGC TGAAAATGCC CGAGGGCACA CGTATTGCCG CCCTGTTCCG CAACGAGCAA TTGCTGCACC CGTCGGGCAG TACCGTGCTG GAAGTTGGCG ACATGCTCTG CGTGATCGGC CACGAGCACA ACCTGCCAGC CCTGGGCAAA CTGTTCAGCC AGGCGCCACA GCGTGGCCTG GACCTGCGTT TCTTCGGCGA CTTCGTGCTC GAAGGCGATG CCGAACTGGG TGCGGTGGCA GCGTTGTACG GCCTGAAACT CGATGGCCTG GACGCGAAAA TGCCGCTGGC GCAGTTCATC CGACAGAAGG TCGGAGGCGC TCCAGTAGTA GGTGACCAGG TCGAATGGCA TGGCACGATC TGGACCGTGG CGACCATGGA CGGGAACAAG ATCCAGAAAG TAGGCGTCAG ATTCCCCGAA GGAACGCGAC CCGGACCAGG ATTGTTCCTC TAA
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Protein sequence | MDASTINSLF LIGALLVGAS ILVSSLSSRL GIPILVIILA VGMVAGVDGG GIIFNNYPTA YLVGNLALAV ILLDGGLRTR VASFRVALWP ALSLATVGVM ITTALTGLVA AWLFNLSLIQ GLLIGAIVGS TDAAAVFSLL GGKGLNERVT ATLEIESGSN DPMAVFLTVT LIDMIASGQT GLHWSLLGHL LREFGIGGLL GLGGGWLMLQ LVNRINLAGG LYPILVVAGG LVVFSLTNAL HGSGFLAVYL CGLVLGNKPI RSRHGILHML DGMAWLAQIG MFLVLGLLVT PHDLLPIALP ALGLALWMIL VARPLSVVAA LLPFKAFHGR EKGFISWVGL RGAVPIILAV FPLMAGLPDA QLFFNLAFFI VLVSLLVQGT SLPWMAKLLK VTVPPDPAPI SRSALEVHVT SEWELFVYRL GAEKWCIGAA LRELKMPEGT RIAALFRNEQ LLHPSGSTVL EVGDMLCVIG HEHNLPALGK LFSQAPQRGL DLRFFGDFVL EGDAELGAVA ALYGLKLDGL DAKMPLAQFI RQKVGGAPVV GDQVEWHGTI WTVATMDGNK IQKVGVRFPE GTRPGPGLFL
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