Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5107 |
Symbol | |
ID | 5872922 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5703917 |
End bp | 5705452 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550245 |
Product | phosphoglyceromutase |
Protein accession | YP_001671327 |
Protein GI | 167036096 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0696] Phosphoglyceromutase |
TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAGTA CGCCCAAACC CCTGGTCCTG ATCATCCTGG ATGGCTTCGG CCACAGCGAA GTCCCTGAAC ACAACGCCAT CTTTGCCGCC AATACGCCGG TCTATGATCG CCTGCGCGCT ACCTTGCCGC ATGGCCTCAT TTCCGGCTCG GGCATGGATG TCGGCCTGCC GGACGGGCAG ATGGGCAACT CCGAAGTCGG TCACATGAAC CTGGGGGCCG GCCGCGTCGT CTACCAGGAC TTCACCCGCG TCACCAAAGC CATCCGCGAT GGCGAGTTCT TCAAAAACCC GGTGCTCACC GGTGCCGTGG ACAAGGCAGC CAGTGCCGGC AAGGCCGTGC ACATCCTCGG CCTGCTGTCC GATGGTGGCG TACACAGCCA CCAGGACCAC CTGGTGGCCA TGGCCGAACT GGCTGCGCAG CGCGGAGCGG AAAAGATCTA CCTGCACGCT TTCCTCGATG GCCGCGACAC CCCGCCACGC AGCGCACAGT CGTCGATCGA ACTGCTCGAC GCCACCTTCG CCAAACTGGG CAAGGGCCGC ATCGCCAGCC TGATCGGCCG CTACTACGCC ATGGACCGCG ATAACCGCTG GGACCGCGTC AGCGCCGCCT ACAACCTGAT CGTCGACAGC GCAGCCGAAT ACACGGCCGA CACCGCCCAG GCCGGCCTGG AAGCGGCCTA CGCCCGTGAC GAAAGCGACG AGTTCGTCAA AGCCACGCGC ATCGGCGAAG CGGTCAAGGT TGAAGACGGC GACGCCGTGG TCTTCATGAA CTTCCGCGCC GACCGTGCTC GCGAGCTGTC CCGTGCGTTT GTCGAGCCGG ACTTCACTGA GTTCGCCCGC GCGCGCCTGC CGAAAATGGC GGCCTACATC GGCCTGACCC AGTACTCGGC AAAAATCCCG GCACCGGCAG CCTTTGCGCC CTCCAGCCTG AACAACGTGC TGGGCGAGTA CCTGGCAAAA AACGGCAAGA CCCAACTGCG CATCGCCGAA ACCGAGAAGT ACGCCCACGT CACCTTCTTC TTTTCCGGCG GCCGCGAAGA GCCGTTCGAG GGCGAAGAGC GCATTCTGAT CCCGTCGCCG AAGGTCGCCA CCTATGACCT GCAGCCGGAA ATGAACGCAC CGCAAGTGAC CGATCGCATC GTCGAAGCCA TCGAGCAGCA GCGCTTCGAC GTGATCGTGG TCAACTACGC CAACGGCGAC ATGGTCGGCC ATACCGGCGT GTTCGAAGCT GCGGTCAAGG CCGTCGAAGC ACTCGATACC TGCGTCGGCC GCATCGTCGA TGCACTGGAG AAAGTCGGCG GCGAAGCCCT GATCACCGCC GACCACGGCA ACGTCGAGCA GATGGAAGAC GAATGCACCG GCCAGGCGCA CACCGCGCAC ACCACCGAGC CGGTACCGTT CATCTATGTG GGTAAGCGCA ACCTGAAAGT GCGCGACGGT GGCGTACTGG CCGACGTGGC GCCGACCATG CTGCAACTGC TGGGGCTGGA AAAGCCGGTG GAAATGACCG GTACTTCGAT TCTGGTCGAC GCCTGA
|
Protein sequence | MTSTPKPLVL IILDGFGHSE VPEHNAIFAA NTPVYDRLRA TLPHGLISGS GMDVGLPDGQ MGNSEVGHMN LGAGRVVYQD FTRVTKAIRD GEFFKNPVLT GAVDKAASAG KAVHILGLLS DGGVHSHQDH LVAMAELAAQ RGAEKIYLHA FLDGRDTPPR SAQSSIELLD ATFAKLGKGR IASLIGRYYA MDRDNRWDRV SAAYNLIVDS AAEYTADTAQ AGLEAAYARD ESDEFVKATR IGEAVKVEDG DAVVFMNFRA DRARELSRAF VEPDFTEFAR ARLPKMAAYI GLTQYSAKIP APAAFAPSSL NNVLGEYLAK NGKTQLRIAE TEKYAHVTFF FSGGREEPFE GEERILIPSP KVATYDLQPE MNAPQVTDRI VEAIEQQRFD VIVVNYANGD MVGHTGVFEA AVKAVEALDT CVGRIVDALE KVGGEALITA DHGNVEQMED ECTGQAHTAH TTEPVPFIYV GKRNLKVRDG GVLADVAPTM LQLLGLEKPV EMTGTSILVD A
|
| |