| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5101 |
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| Symbol | |
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| ID | 5872916 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5699664 |
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| End bp | 5701100 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641550239 |
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| Product | nitrogen metabolism transcriptional regulator NtrC |
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| Protein accession | YP_001671321 |
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| Protein GI | 167036090 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGAA GTGAAACCGT ATGGATCGTC GACGATGATC GCTCCATCCG CTGGGTCCTG
GAAAAAGCCC TGCAACAAGA AGGCATGACC ACCCAGAGCT TCGACAGCGC AGACGGTGTG
ATGGGGCGCC TGGCGCGCCA GCAACCGGAC GTGATCATCT CCGACATTCG CATGCCTGGC
GCCAGCGGCC TCGACTTGCT GGCACAGATC CGCGAACAGC ACCCGCGCCT GCCGGTGATC
ATCATGACCG CCCATTCCGA CTTGGACAGC GCGGTGGCCT CGTACCAGGG GGGGGCCTTC
GAGTACCTGC CCAAGCCATT CGACGTCGAC GAAGCGGTCT CGCTGGTCAA GCGCGCCAAC
CAGCACGCTC AGGAACAGCA GGGCCTGGAT GTGCCACAGA ACCTGGCGCG TACCCCGGAA
ATTATCGGTG AAGCCCCGGC GATGCAGGAG GTGTTCCGCG CCATCGGCCG CCTCAGCCAC
TCCAACATCA CCGTGCTGAT CAACGGCGAG TCCGGCACCG GCAAAGAGCT GGTGGCCCAC
GCCCTGCACC GGCACAGCCC GCGCGCGGCG TCGCCGTTCA TTGCCCTGAA CATGGCCGCC
ATCCCCAAGG ACTTGATGGA ATCGGAGCTG TTCGGCCATG AAAAGGGGGC CTTCACCGGC
GCTGCCAACC TGCGCCGGGG CCGTTTCGAG CAGGCCGATG GCGGTACGCT GTTCCTCGAC
GAAATCGGTG ACATGCCTGC CGACACCCAG ACCCGCCTGC TGCGCGTGCT GGCCGATGGC
GAGTTCTATC GTGTGGGCGG CCATGTACCG GTCAAGGTCG ACGTGCGCAT CATCGCCGCC
ACCCACCAGA ACCTGGAGTC ACTGGTGCAA GCCGGCAAGT TCCGTGAGGA CTTGTTCCAC
CGCCTGAACG TGATCCGTAT CCATATCCCG CGCCTGGCCG ACCGCCGCGA AGACATCCCC
GCACTCGCCC GCCACTTCCT TGCCCGGGCC GCTCAGGAGC TGGCGGTCGA GCCGAAGGTC
CTCAAGCCTG AGACCGAAGA GTTCATCCGC AACCTGCCCT GGCCGGGCAA CGTGCGGCAG
ATGGAAAACA CTTGCCGCTG GATCACCGTG ATGGCTTCCA GCCGCGAAGT GCTGATCGGC
GACCTGCCGC CCGAGCTTCT GAACCTGCCA CAGGACGCCG CACCGGTGAC CAACTGGGAG
CAGGCCCTGC GCCAGTGGGC CGACCAGGCG TTGGCGCGCG GCCAGACCAA CCTGCTGGAC
AGCGCGGTGC CGAGTTTTGA ACGGATCATG ATCGAGACGG CGCTCAAGCA CACCGCCGGT
CGGCGCCGGG ATGCGGCGCT GTTGCTGGGT TGGGGGCGTA ACACCCTGAC GCGCAAGATC
AAGGAGCTGG GGATGAATGT GGCGGGTGGG GATGATGAGG AAGGTGAAGA CCACTGA
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| Protein sequence | MSRSETVWIV DDDRSIRWVL EKALQQEGMT TQSFDSADGV MGRLARQQPD VIISDIRMPG
ASGLDLLAQI REQHPRLPVI IMTAHSDLDS AVASYQGGAF EYLPKPFDVD EAVSLVKRAN
QHAQEQQGLD VPQNLARTPE IIGEAPAMQE VFRAIGRLSH SNITVLINGE SGTGKELVAH
ALHRHSPRAA SPFIALNMAA IPKDLMESEL FGHEKGAFTG AANLRRGRFE QADGGTLFLD
EIGDMPADTQ TRLLRVLADG EFYRVGGHVP VKVDVRIIAA THQNLESLVQ AGKFREDLFH
RLNVIRIHIP RLADRREDIP ALARHFLARA AQELAVEPKV LKPETEEFIR NLPWPGNVRQ
MENTCRWITV MASSREVLIG DLPPELLNLP QDAAPVTNWE QALRQWADQA LARGQTNLLD
SAVPSFERIM IETALKHTAG RRRDAALLLG WGRNTLTRKI KELGMNVAGG DDEEGEDH
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