Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_5072 |
Symbol | |
ID | 5872887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5665033 |
End bp | 5665767 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641550210 |
Product | ABC transporter related |
Protein accession | YP_001671292 |
Protein GI | 167036061 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTGAAG TCCGTGACCT GCTGAAAGTC TTCGACACCC GTGGCCAGGT GGTACGGGCT GTGGATAACG TCACCACCCA GGTCGCCAAG GGCGAAGTGG TGGTAGTGCT CGGCCCGTCG GGGTCGGGCA AGTCGACCTT CCTGCGTTGC CTCAACGGCC TGGAGCATTT CGACCAGGGC CATGTGGCCA TCGACGGTCT GCAGCTGGCC GACCCCAAGA CCGACATCAA CGCCTACCGC CGCGAAGTCG GCATGGTGTT CCAGCACTTC AACCTGTTCC CGCACATGAC CGTGCTGGAA AACCTGTGCC TGGCGCAGAA GGTGGTGCGC AAGCGCAACA AGGCTGACCG CGAAGCCAAG GCCCGGGCGC TGCTGGAAAA GGTCGGCATT GCGCAAAAGG CCAACGAGTT CCCGTCTCGG CTTTCTGGCG GGCAGCAGCA GCGCGTAGCG ATTGCCCGAG CGCTGGCGAT GGACCCGAAA GTGATGCTGT TCGACGAACC AACCTCGGCG CTCGACCCGG AAATGGTCGG CGAGGTACTG GACGTGATGA AGACCTTGGC CCAGGAAGGC ATGACCATGG TCTGCGTCAC CCACGAAATG GGCTTTGCCC GCGAAGTGGC CGACCGTGTG CTGTTCTTCG ATCATGGCAA GCTGCTGGAG GATTCGGCCC CGGCCGCGTT CTTCGCCGCC CCGAAAGACC CGCGTGCGCA GGCCTTCCTG CGCCAGGTGC TGTAA
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Protein sequence | MIEVRDLLKV FDTRGQVVRA VDNVTTQVAK GEVVVVLGPS GSGKSTFLRC LNGLEHFDQG HVAIDGLQLA DPKTDINAYR REVGMVFQHF NLFPHMTVLE NLCLAQKVVR KRNKADREAK ARALLEKVGI AQKANEFPSR LSGGQQQRVA IARALAMDPK VMLFDEPTSA LDPEMVGEVL DVMKTLAQEG MTMVCVTHEM GFAREVADRV LFFDHGKLLE DSAPAAFFAA PKDPRAQAFL RQVL
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