Gene PputGB1_5071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5071 
Symbol 
ID5872886 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5663055 
End bp5664998 
Gene Length1944 bp 
Protein Length647 aa 
Translation table11 
GC content63% 
IMG OID641550209 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_001671291 
Protein GI167036060 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGGCT ACCTCAACCG CAAGCTCGGC AACATCAGTG TCGCTGCCAA GCTGGCCCTC 
GGCTTCGCCG TGGTCCTGCT ACTCACCCTG GCCACCACAC TCAGTGGCTG GCGCGCCCTG
GATGGCGCGA TCGTGCGCTC GCAGCAGCTC GGCGAAATAA ACCTGATCAA CGACCTGGGC
AAAGACCTGC GCGCAGAACG CATCACCTAC CGCGTGCTCA GCGACGACAC CAGCAAGACG
CGCATGACCG GCATCTACGA CCAGCTCGAA AACCTCCTGA CCACGTTGCA GCATCGCAGC
AGCATCGATG AATCACGGCA GTTGCTGGCT AAAGACCTGG CACTGTTGCA GCGCATGCGC
AGCGACTTCA GCGAACTGCA GCAATACGTC GCCAAGCGTA CTGGCTTGCG TAAGGCCATG
CAGATACAGG AGCAGAAACT CAACGAGGCG ATCGACGAAC TGCAAACCCA GGCTTTACTG
AAGATGCCTG CAGACAGCCA GCAAAACGGT GTACTGGGGC TGATGGACAC CCTCACCCGG
CATGTCGACG GGGCCAACCA GCAAAGCCTG GTGCCGGCCT ATACCTTCGA TCCGGTCGAG
GATTTCGCCA AAGTCGGCGA CAACGCCCTG GATGCCGCCA ACAGTAGCCT CGGGCAACTG
CTTGCAGGCC TTGCGCCGCT GGGCTTGCCA CGCGCAGTCA GCGAGCAGCC TGGTGTCGAG
CTGGCCAAGT ACCGCGCCAG CCTTGAGCAG TACCGCCACG CCGCCGTACG TGTCGAGCAG
TTGCAGAACA ACCTGGACAT CATGGGCACC GAGCTGCGGG CGACGAGCCT CGAACTGGGC
AAACGCAAGG TCGAACAACG CGACAGTGAG GCCCTGGCCG CCCGCTCGCT GCTGACCAGC
GTGGCGCTGA TGGCACTGGT GGTAGGGGTA TTGGCCGCCT GGCTGATCAC CGTGCAGATC
ACCCAACCGT TGCGCCAGAC ACTCGCCGTG GCCGCGCGTA TCGCCAAGGG TGACCTGAGC
CAGGTTGACG CAGTGCACCG CCGCGACGAA ATGGGCCAGC TGCAAACCAG CATGCGCCAG
ATGACCTTGA GCCTGCGCGA ACTGATCGGT GGCATCGACC AGGGTGTCGG CCAACTGTCA
CAGGCCGCCA CTCAGTTGGC GGCCAGTAGC GAGGACACCA AGCTGCGCAT CAACCAACAG
CGCGAAGAGA CCGACCAAGT GGCCACCGCC ATGAACCAGA TGAGCGCCAC CGTGCAGGAA
GTGGCACAGA ACGCCGAGCA GGCCTCGCTG GCCGCGAGCA ACGCCGACCA GCAGGCACAA
CTGGGCGACC GAGTGGTGGC AGAGGCCATC GGCCGTATCG AACAACTGGC CGGGCAGATG
GACCATTGCC TGGCGGCCAT GCAACACCTG GCGGGCGAGA GCCAGCGCAT TGGCAGCATC
CTCGACGTGA TCAAGTCGGT TTCCGAACAG ACCAACCTGC TGGCCCTGAA CGCGGCGATC
GAAGCTGCAC GGGCGGGAGA AGCCGGGCGT GGCTTTGCCG TGGTGGCCGA TGAAGTGCGC
GGCCTGGCCC AGCGCACCTC GACGGCGACC GAGGAGATTG GCCAGTTGAT CGACAGCCTG
CACAACGGTA CCGACGAAGT GACCCGCCTG CTGGACAGCA GCAAGAGCCT GACCGAGCAA
AGCGTGGAGC TGAGCCGCAA GGCCGGGCAG GCGTTGGGCC AGATAACCGA TACGGTGTCG
AGCATTCAGG GCATGAACCA GCAAATCGCC ACGGCCAGTG AAGAACAGAG CGTGGTGGCC
GAGCAGATCA ACCGCAGTGT GATCAACGTG CGGGATGTGT CGGATCAGAC CAGTGCGGCC
AGTGAACAGA CGGCGGCTTC GAGCGGGGAG CTGGAGCAGC TGGGGCAGCA GTTGCGGGGG
ATGGTGGGGC GGTTCAACAT CTGA
 
Protein sequence
MLGYLNRKLG NISVAAKLAL GFAVVLLLTL ATTLSGWRAL DGAIVRSQQL GEINLINDLG 
KDLRAERITY RVLSDDTSKT RMTGIYDQLE NLLTTLQHRS SIDESRQLLA KDLALLQRMR
SDFSELQQYV AKRTGLRKAM QIQEQKLNEA IDELQTQALL KMPADSQQNG VLGLMDTLTR
HVDGANQQSL VPAYTFDPVE DFAKVGDNAL DAANSSLGQL LAGLAPLGLP RAVSEQPGVE
LAKYRASLEQ YRHAAVRVEQ LQNNLDIMGT ELRATSLELG KRKVEQRDSE ALAARSLLTS
VALMALVVGV LAAWLITVQI TQPLRQTLAV AARIAKGDLS QVDAVHRRDE MGQLQTSMRQ
MTLSLRELIG GIDQGVGQLS QAATQLAASS EDTKLRINQQ REETDQVATA MNQMSATVQE
VAQNAEQASL AASNADQQAQ LGDRVVAEAI GRIEQLAGQM DHCLAAMQHL AGESQRIGSI
LDVIKSVSEQ TNLLALNAAI EAARAGEAGR GFAVVADEVR GLAQRTSTAT EEIGQLIDSL
HNGTDEVTRL LDSSKSLTEQ SVELSRKAGQ ALGQITDTVS SIQGMNQQIA TASEEQSVVA
EQINRSVINV RDVSDQTSAA SEQTAASSGE LEQLGQQLRG MVGRFNI