Gene PputGB1_5052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_5052 
Symbol 
ID5872867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5642673 
End bp5643050 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content64% 
IMG OID641550190 
Producthypothetical protein 
Protein accessionYP_001671272 
Protein GI167036041 
COG category[S] Function unknown 
COG ID[COG3536] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCC TGCCCACTGC CATCAACCTG CACAAAGCCT CGAAAACCCT CAGCCTCACC 
TACGCCCCCG GCGAGGTCTA CCAACTGCCC GCCGAATTCC TGCGCGTGCA CTCCCCCTCC
GCCGAAGTCC AGGGCCACGG CAACCCCATT CTGCAGTTCG GCAAGATCAA CGTCGGCCTC
GTCGGCCTCG AACCCGCCGG CCAATATGCA CTGAAACTGA CCTTCGACGA CGGCCACGAC
AGCGGTCTGT TCACCTGGGA ATACCTCGAG CAGCTGTGCC TGCGCCAGGA ACAGCTGTGG
GCGGAATACC TCGACGAGCT GCACAAGGCC GGCAAATCCC GCGACCCGGC CGAGTCGGTG
GTCAAACTGA TGCTCTAG
 
Protein sequence
MARLPTAINL HKASKTLSLT YAPGEVYQLP AEFLRVHSPS AEVQGHGNPI LQFGKINVGL 
VGLEPAGQYA LKLTFDDGHD SGLFTWEYLE QLCLRQEQLW AEYLDELHKA GKSRDPAESV
VKLML