| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_5000 |
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| Symbol | |
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| ID | 5872815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5584470 |
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| End bp | 5585897 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641550138 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001671220 |
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| Protein GI | 167035989 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAC GCACCCCGCT GGACCCCGTC ACCGCCCGCT GGATCCCCTG GGTGGTAGCC
ATCGCCTTCT TCATGCAGTC CCTGGACGGC ACTATCCTCA ACACCGCGCT GCCGGCCATG
GCCCGCTCGC TGGCCGAAGA CCCGCTGCGC ATGCAGGGCG TGATCATCGC CTACATGCTC
ACCGTGGCCC TGCTGATCCC TGCTTCGGGC TGGATCGCCG ACCGCTTTGG CACCAAACGC
ATCTTCTTCA GCGCCATCCT GCTGTTCAGC TTCGGCTCGC TGCTGTGCGC CGCCGCCAAC
AGCCTCGGTT TCCTGATCTT CGCCCGCGTC GTGCAGGGCC TGGGCGGTGC GCTGATGCTG
CCGGTTGGGC GGCTGGTGGT GCTGCGTGCT TACCCGCGCA GCGAACTGGT GCGGATCATG
AGCTTCATCA CCATCCCCGG CCTGCTGGGG CCATTGCTGG GCCCCACGGT CGGTGGCTGG
CTGGTGGAAA TCCTCAGCTG GCACTGGATC TTCCTGCTCA ACCTGCCGGT TGGCCTGATC
GGCTGCATTG CAGTATGGAA GTTCATCCCG GACCTGCGCG GGGCGGAGCG AACCTCGTTC
GACGGCCCCG GCTTCCTGCT GTTCGGCGCG GCGATGGTGC TGATCACCAT CGCCATGGAA
GGCCTGGGCG AGTTGCACCT GCCGCACTTG CGGGTCATGT TGCTGCTGTT CGCCGGTATG
GCCTGCCTTG CCGCCTACTG GCTGCGCGCC GGGCGCGACC CGGAGCCACT GTTCTCGCCC
AGCCTGTTCC GCGTGCGTAC CTTCGCCATC GGCATCCTCG GCAACCTGTT CGCCCGCCTG
GGCAGCGGCG CCCTGCCCTT CCTGGTGCCA TTACTGCTGC AGGTGGCGCT GGGCTACTCT
CCGGCGCAGG CTGGCATGAG CATGATCCCG CTGGCGGCGG CGGCCATGCT TGCCAAGTCC
ATCGCCAGGC CGCTGATCGA GCGGTTCGGC TACCGCATCA TCCTCACCGG CAACACGTTG
CTGCTGGGCC TGCTGCTGGC CAGCCTCGGC CTGGTCGACG AGCAAACGCC CTACGCCGTG
CTGTTGATCC AGCTGGGCCT GCTCGGCGCT GTCAACTCGA TGCAGTTCAC GGCCATGAAC
ACAGTAACCC TGATCGACCT GGACGACGCC AGCGCCAGCA GCGGCAACAG CCTGCTGTCG
GTGGTCGCGC AACTGGCGTT GAGCCTGGGC GTGGCCTGCG CCGGCGCACT GCTCGGCGGC
TTTACCGCAG CGGGCAGTGC CGAGGGCGTG GAAAGCACCC TGGGCGCCTT CCAGCTGACC
TTCGTCACCA TCGGCATCAT GGCCATGCTG GCGGCGGCGA TCTTCCTGCA ACTGGCGCCG
ACGGACGGAA GGCGTGCCCG TCGTCCGGAA CAACACATGG AATCATAG
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| Protein sequence | MPERTPLDPV TARWIPWVVA IAFFMQSLDG TILNTALPAM ARSLAEDPLR MQGVIIAYML
TVALLIPASG WIADRFGTKR IFFSAILLFS FGSLLCAAAN SLGFLIFARV VQGLGGALML
PVGRLVVLRA YPRSELVRIM SFITIPGLLG PLLGPTVGGW LVEILSWHWI FLLNLPVGLI
GCIAVWKFIP DLRGAERTSF DGPGFLLFGA AMVLITIAME GLGELHLPHL RVMLLLFAGM
ACLAAYWLRA GRDPEPLFSP SLFRVRTFAI GILGNLFARL GSGALPFLVP LLLQVALGYS
PAQAGMSMIP LAAAAMLAKS IARPLIERFG YRIILTGNTL LLGLLLASLG LVDEQTPYAV
LLIQLGLLGA VNSMQFTAMN TVTLIDLDDA SASSGNSLLS VVAQLALSLG VACAGALLGG
FTAAGSAEGV ESTLGAFQLT FVTIGIMAML AAAIFLQLAP TDGRRARRPE QHMES
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