Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4997 |
Symbol | |
ID | 5872812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5579747 |
End bp | 5581549 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550135 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001671217 |
Protein GI | 167035986 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAGA CCCTGCTCAG CCCTCGTAAC CTGGCCTTCG AGCTCTACGA AGTACTCGAC GCCGAAGCCC TCACCCAGCG CCCGCGTTTC GCCGAGCACA GCCGTGAAAC CTTCGACGCG GCACTGACCA CCGCCCGCAC CATCGCCGAA AAGTACTTCG CCCCGCACAA CCGCAAGGCC GACGAGAACG AGCCGCGCTA CGTGGATGGT CGCGCGGAGC TGATCACCGA GGTGAAGCCT GCCGTCGACG CCTTCCTCGA AGCCGGCTTT CTCAACACCA ACCGGGACTT CGAGGTGGGT GGCATGCAGC TGCCCAGCCT GGTGTCGCAG GCCTGCTTCG CCCACTTCCA GGCCGCCAAC GCCGGCACCA CGGCCTACCC ATTCCTGACC ATGGGCGCAG CCAACCTGAT CGAGAGTTTC GGCACAGAGG AACAGAAGCG CCTGTTCCTG CAACCGATGA TCGAGGGCCG CTACTTCGGT ACCATGGCGC TGACCGAGCC CCACGCCGGC TCGTCTCTGG CCGACATCCG CACCCGCGCC GAACCTGCAG CCGACGGCAG CTACCGGCTC AAAGGCAACA AGATCTTCAT CTCCGGTGGC GACCACGAAC TGTCGGAAAA CATCGTGCAC ATGGTGCTGG CCAAGCTGCC GGACGCCCCG CCCGGGGTGA AAGGCATCTC GCTGTTCATC GTGCCCAAGT TCAACGTCAA CCCGGACGGC AGCCGTGGCC CGCGTAACGG CGTGCTGCTG GCCGGCTTGT TCCACAAGAT GGGCTGGCGT GGCACCACCT CCACCGCGCT GAACTTCGGC GACAACGGCG AGTGCGTCGG CTACCTGGTG GGCCAGCCGC ACCAGGGCCT GGCCTGCATG TTCCAGATGA TGAACGAGGC GCGTATCGGC GTCGGCATGG GTGCAGTGAT GCTAGGTTAC GCCGGCTACC TTTACTCGTT GGAATACGCC CGACAGCGTC CGCAGGGCCG GCTACCGGAC AACAAAGACC CACACAGCCA AGCGGTGCCG ATCATCGAAC ATAGCGATGT AAAGCGCATG CTGCTGGCCC AGAAGGCTTA CGTGGAAGGT GCCTTTGACC TGGGCCTGTA TGCCGCCCGT CTATTCGACG ATACTCACAC CGCCAGCGAA GAAAGCACCC GCCAGCAGAC CCAGGAACTG CTCGACCTGC TGACTCCGAT CGTCAAGTCG TGGCCGTCGA CGTTCTGCCT CAAGGCCAAC GAACTGGCGA TCCAGATTCT CGGCGGCCAC GGCTACACCC GCGAATATCC GGTGGAACAG TATTACCGCG ACAACCGCCT GAACCCGATT CACGAAGGCA CCGAGGGCAT TCAGTCGCTC GACTTGCTTG GCCGCAAGCT GGCGCAAAAC AATGGCGCCG GGCTCAAACA ACTCATCCGC CTGATCGCCA ACACCGGCGA GCGCGCCAGC CACCACCCCA ACCTCGACCC TCTGCGCCAG CCGCTGGAGC AACTAGTCAA CCGCCTGCAA AGCGTAACGC TGGCCCTGCT CGGCGACCTG GCACAAGGCA AAGTCGCTGG TGCCTTGGCC AACTCGGCCC TGTACCTCAA GGCCTTCGGC CACTGCGTTA TCGGCTGGCG CTGGCTGGAG CAGGCGATTC ACGCCGAGCT TGGTTTGCTA AAGGGCAACG CTGCCGACCG CGACTTCTAC CTCGGCAAGC TCCAGGCCGC ACGTTATTTC CTGACCTGGG AAGTACCGGG CTGCCATAAT GAGCTGGCAT TGCTAGAGGC GCGCGACGAT ACCTGCCTCG CCATGCAAGA CGGGTGGTTC TAG
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Protein sequence | MPETLLSPRN LAFELYEVLD AEALTQRPRF AEHSRETFDA ALTTARTIAE KYFAPHNRKA DENEPRYVDG RAELITEVKP AVDAFLEAGF LNTNRDFEVG GMQLPSLVSQ ACFAHFQAAN AGTTAYPFLT MGAANLIESF GTEEQKRLFL QPMIEGRYFG TMALTEPHAG SSLADIRTRA EPAADGSYRL KGNKIFISGG DHELSENIVH MVLAKLPDAP PGVKGISLFI VPKFNVNPDG SRGPRNGVLL AGLFHKMGWR GTTSTALNFG DNGECVGYLV GQPHQGLACM FQMMNEARIG VGMGAVMLGY AGYLYSLEYA RQRPQGRLPD NKDPHSQAVP IIEHSDVKRM LLAQKAYVEG AFDLGLYAAR LFDDTHTASE ESTRQQTQEL LDLLTPIVKS WPSTFCLKAN ELAIQILGGH GYTREYPVEQ YYRDNRLNPI HEGTEGIQSL DLLGRKLAQN NGAGLKQLIR LIANTGERAS HHPNLDPLRQ PLEQLVNRLQ SVTLALLGDL AQGKVAGALA NSALYLKAFG HCVIGWRWLE QAIHAELGLL KGNAADRDFY LGKLQAARYF LTWEVPGCHN ELALLEARDD TCLAMQDGWF
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