Gene PputGB1_4997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4997 
Symbol 
ID5872812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5579747 
End bp5581549 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content64% 
IMG OID641550135 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001671217 
Protein GI167035986 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAGA CCCTGCTCAG CCCTCGTAAC CTGGCCTTCG AGCTCTACGA AGTACTCGAC 
GCCGAAGCCC TCACCCAGCG CCCGCGTTTC GCCGAGCACA GCCGTGAAAC CTTCGACGCG
GCACTGACCA CCGCCCGCAC CATCGCCGAA AAGTACTTCG CCCCGCACAA CCGCAAGGCC
GACGAGAACG AGCCGCGCTA CGTGGATGGT CGCGCGGAGC TGATCACCGA GGTGAAGCCT
GCCGTCGACG CCTTCCTCGA AGCCGGCTTT CTCAACACCA ACCGGGACTT CGAGGTGGGT
GGCATGCAGC TGCCCAGCCT GGTGTCGCAG GCCTGCTTCG CCCACTTCCA GGCCGCCAAC
GCCGGCACCA CGGCCTACCC ATTCCTGACC ATGGGCGCAG CCAACCTGAT CGAGAGTTTC
GGCACAGAGG AACAGAAGCG CCTGTTCCTG CAACCGATGA TCGAGGGCCG CTACTTCGGT
ACCATGGCGC TGACCGAGCC CCACGCCGGC TCGTCTCTGG CCGACATCCG CACCCGCGCC
GAACCTGCAG CCGACGGCAG CTACCGGCTC AAAGGCAACA AGATCTTCAT CTCCGGTGGC
GACCACGAAC TGTCGGAAAA CATCGTGCAC ATGGTGCTGG CCAAGCTGCC GGACGCCCCG
CCCGGGGTGA AAGGCATCTC GCTGTTCATC GTGCCCAAGT TCAACGTCAA CCCGGACGGC
AGCCGTGGCC CGCGTAACGG CGTGCTGCTG GCCGGCTTGT TCCACAAGAT GGGCTGGCGT
GGCACCACCT CCACCGCGCT GAACTTCGGC GACAACGGCG AGTGCGTCGG CTACCTGGTG
GGCCAGCCGC ACCAGGGCCT GGCCTGCATG TTCCAGATGA TGAACGAGGC GCGTATCGGC
GTCGGCATGG GTGCAGTGAT GCTAGGTTAC GCCGGCTACC TTTACTCGTT GGAATACGCC
CGACAGCGTC CGCAGGGCCG GCTACCGGAC AACAAAGACC CACACAGCCA AGCGGTGCCG
ATCATCGAAC ATAGCGATGT AAAGCGCATG CTGCTGGCCC AGAAGGCTTA CGTGGAAGGT
GCCTTTGACC TGGGCCTGTA TGCCGCCCGT CTATTCGACG ATACTCACAC CGCCAGCGAA
GAAAGCACCC GCCAGCAGAC CCAGGAACTG CTCGACCTGC TGACTCCGAT CGTCAAGTCG
TGGCCGTCGA CGTTCTGCCT CAAGGCCAAC GAACTGGCGA TCCAGATTCT CGGCGGCCAC
GGCTACACCC GCGAATATCC GGTGGAACAG TATTACCGCG ACAACCGCCT GAACCCGATT
CACGAAGGCA CCGAGGGCAT TCAGTCGCTC GACTTGCTTG GCCGCAAGCT GGCGCAAAAC
AATGGCGCCG GGCTCAAACA ACTCATCCGC CTGATCGCCA ACACCGGCGA GCGCGCCAGC
CACCACCCCA ACCTCGACCC TCTGCGCCAG CCGCTGGAGC AACTAGTCAA CCGCCTGCAA
AGCGTAACGC TGGCCCTGCT CGGCGACCTG GCACAAGGCA AAGTCGCTGG TGCCTTGGCC
AACTCGGCCC TGTACCTCAA GGCCTTCGGC CACTGCGTTA TCGGCTGGCG CTGGCTGGAG
CAGGCGATTC ACGCCGAGCT TGGTTTGCTA AAGGGCAACG CTGCCGACCG CGACTTCTAC
CTCGGCAAGC TCCAGGCCGC ACGTTATTTC CTGACCTGGG AAGTACCGGG CTGCCATAAT
GAGCTGGCAT TGCTAGAGGC GCGCGACGAT ACCTGCCTCG CCATGCAAGA CGGGTGGTTC
TAG
 
Protein sequence
MPETLLSPRN LAFELYEVLD AEALTQRPRF AEHSRETFDA ALTTARTIAE KYFAPHNRKA 
DENEPRYVDG RAELITEVKP AVDAFLEAGF LNTNRDFEVG GMQLPSLVSQ ACFAHFQAAN
AGTTAYPFLT MGAANLIESF GTEEQKRLFL QPMIEGRYFG TMALTEPHAG SSLADIRTRA
EPAADGSYRL KGNKIFISGG DHELSENIVH MVLAKLPDAP PGVKGISLFI VPKFNVNPDG
SRGPRNGVLL AGLFHKMGWR GTTSTALNFG DNGECVGYLV GQPHQGLACM FQMMNEARIG
VGMGAVMLGY AGYLYSLEYA RQRPQGRLPD NKDPHSQAVP IIEHSDVKRM LLAQKAYVEG
AFDLGLYAAR LFDDTHTASE ESTRQQTQEL LDLLTPIVKS WPSTFCLKAN ELAIQILGGH
GYTREYPVEQ YYRDNRLNPI HEGTEGIQSL DLLGRKLAQN NGAGLKQLIR LIANTGERAS
HHPNLDPLRQ PLEQLVNRLQ SVTLALLGDL AQGKVAGALA NSALYLKAFG HCVIGWRWLE
QAIHAELGLL KGNAADRDFY LGKLQAARYF LTWEVPGCHN ELALLEARDD TCLAMQDGWF