Gene PputGB1_4960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4960 
Symbol 
ID5872775 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5533182 
End bp5533991 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content65% 
IMG OID641550098 
Productrhodanese domain-containing protein 
Protein accessionYP_001671180 
Protein GI167035949 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2897] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.742551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACT TTTCCGGCCT GCCCCTGGTG ATCGAAGCTG CAGACCTGCT GCCACGCCTG 
GATTCGCCGC AGCTGATCCT GGTCGACCTG AGCAGCGCCA ACCGCTATGT CAGCGGGCAT
ATCCCCGGCG CACGCTTTGT CGAAGGCAAG CGCACCCAGC TTGGCCAGCC ACCCGCGCCC
GGCCTGCTGC CGGCCCTGGG CGAACTGGAA AAACTGTTCA GCGAACTCGG CCATCGCGAC
GACGCCGTGT ATGTGGTGTA CGACGATGAA GGCGGCGGCT GGGCGGGGCG TTTCATCTGG
CTGCTCGATG TGATCGGGCA CAAGGGCTAC CACTACCTCA ATGGCGGTAT CCAGGCCTGG
CCGGCAGATA CGCTGTCCAC TGAAGTGCCC GCCAGCGGCA ACACCCCGGT ACGCCTGCGT
ATCGACAGCG CCCCCACGGC CACGCGCGAG TACCTGCAAA GCCGCCTGGG CGCCGATGAC
CTGGTCATCT GGGACGCGCG CGGCCCGCAG GAATTCAGTG GCGAGAAAGT GCTGGCAGCC
AAGGGCGGCC ACATCCCCGG TGCGATCAAC TTCGAGTGGA CCGCCGGCAT GGACCTCAAC
GACCACCTGC GCATTCGCCA GGACATCGCC GACGTCCTGC TGGAGCTGGG CATCACACCG
GACAAGGAAG TGATCACCCA TTGCCAGACC CACCGCCGCT CCGGCTTCAC TTATCTGGTG
GCCAAGGCCC TCGGCTACCC ACGCGTCAAG GCTTACGCCG GCTCGTGGAG CGAATGGGGC
AACCACCCGG ACACGCCTGT AGAAGTTTAA
 
Protein sequence
MTDFSGLPLV IEAADLLPRL DSPQLILVDL SSANRYVSGH IPGARFVEGK RTQLGQPPAP 
GLLPALGELE KLFSELGHRD DAVYVVYDDE GGGWAGRFIW LLDVIGHKGY HYLNGGIQAW
PADTLSTEVP ASGNTPVRLR IDSAPTATRE YLQSRLGADD LVIWDARGPQ EFSGEKVLAA
KGGHIPGAIN FEWTAGMDLN DHLRIRQDIA DVLLELGITP DKEVITHCQT HRRSGFTYLV
AKALGYPRVK AYAGSWSEWG NHPDTPVEV