| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4954 |
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| Symbol | |
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| ID | 5872769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5527134 |
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| End bp | 5527676 |
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| Gene Length | 543 bp |
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| Protein Length | 180 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641550092 |
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| Product | oligoribonuclease |
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| Protein accession | YP_001671174 |
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| Protein GI | 167035943 |
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| COG category | [A] RNA processing and modification |
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| COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.445881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACC CACAGAACCT GATCTGGATC GACCTGGAAA TGACCGGCCT GGATCCAGAC
AGCGACGTCA TCATCGAAAT GGCAACCATC GTCACCGACA GCGAGCTGAA CACCCTGGCC
GAAGGGCCGG TGATCGCCAT CCACCACAGT GACGACGTGC TGGCGCGTAT GGATGAGTGG
AACACCCGCA CCCATGGCGC TTCGGGCCTG ACCCAGCGCG TGCGCGAGAG CAAGGTCAGC
ATGGCTGAAG CCGAGGCGCA GACCATCGCC TTCCTTGAAC AGTGGGTACC CAAAGGCAAG
TCGCCGATCT GCGGCAACAG CATCTGCCAG GACCGCCGTT TCCTCTACCG TCACATGCGC
AACCTGGAAA ACTACTTCCA CTATCGCAAC CTGGATGTTT CCACTCTGAA GGAGCTGGCC
GCGCGCTGGG CGCCGAATGT GCGTGACAGC TTCAAGAAGG GCAATACCCA CCTGGCGCTG
GACGATATTC GCGAGTCGAT CGCCGAACTG CGTCACTACC GCGAGCACTT CATCAAGCTG
TGA
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| Protein sequence | MQNPQNLIWI DLEMTGLDPD SDVIIEMATI VTDSELNTLA EGPVIAIHHS DDVLARMDEW
NTRTHGASGL TQRVRESKVS MAEAEAQTIA FLEQWVPKGK SPICGNSICQ DRRFLYRHMR
NLENYFHYRN LDVSTLKELA ARWAPNVRDS FKKGNTHLAL DDIRESIAEL RHYREHFIKL
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