| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4931 |
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| Symbol | rplI |
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| ID | 5872744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5501293 |
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| End bp | 5501739 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 641550067 |
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| Product | 50S ribosomal protein L9 |
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| Protein accession | YP_001671151 |
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| Protein GI | 167035920 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0359] Ribosomal protein L9 |
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| TIGRFAM ID | [TIGR00158] ribosomal protein L9 |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0000100703 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGAACTGA TCCTGCTGGA AAAAGTCGCT AACCTGGGCA ACCTGGGCGA CAAAGTAAAA
GTTAAGGCTG GTTACGGCCG TAACTTCCTG CTGCCATTCG GCAAGGCCAC CGTTGCCAAC
GCCGCCAACC TGGCTGCGTT CGAAGAACGT CGCGCCGAGC TGGAAAAAGC AGCTGCTGAC
AAGAAATCGT CGGCTGAAAG CCGTGCTGCC CAACTGGCCG AGCTGGAAGT GACCATCACT
GCCACCGCTG GCGACGAAGG CAAGCTGTTC GGTTCGATCG GCACCCACGA CATCGCTGAC
GCCCTGACCG CCTCCGGCGT AGAAGTGGCC AAAGCTGAAG TTCGTCTGCC GAACGGCACC
ATCCGTCAGG TTGGCGAATA CGACGTAGCC GTGCACCTGC ACAGCGACGT TGAAGCCACC
GTACGTGTGG TCGTCGTAGC TGCCTAA
|
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| Protein sequence | MELILLEKVA NLGNLGDKVK VKAGYGRNFL LPFGKATVAN AANLAAFEER RAELEKAAAD
KKSSAESRAA QLAELEVTIT ATAGDEGKLF GSIGTHDIAD ALTASGVEVA KAEVRLPNGT
IRQVGEYDVA VHLHSDVEAT VRVVVVAA
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