| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4921 |
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| Symbol | |
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| ID | 5872734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5488482 |
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| End bp | 5489783 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641550057 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001671141 |
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| Protein GI | 167035910 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0573712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000000000182248 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCCGTTG CCAAAACTGC CTCTGTTAGC GAAACCAAGG GTTTCGACAT TAAACGCAGC
CTGCTGGAGA CCCTCGTCGC TGGCCTGCTG GCACTCATCG TGTTTGGCCC GGTCGTTGGC
GTGGTGCTCG ACGGCTACAC CTTCAATGCC GAGCCGCGCC GCGTGGCGTG GCTGGTCGGT
GGTGTGATGG TCGGGCGCTT CCTGCTCAGC CTGTTCCTGC AGACCGCCCC TGGGCAGCGC
ATGCTCCAGA GCTTCGACAG CGGTGGCTCG GGCGTGCATG TGAATGCCCC GGACTACAAG
TCGCGCCTGC GCTACATCAT CCCTGCACTG ATCGTGATTG CCATCGTCTT CCCGATCTTC
GCCAACAAGT ACCTGCTGAC CGTGGTCATC CTCGGCCTGA TCTACGTGCT GCTGGGCCTT
GGCCTGAACA TCGTGGTCGG CTTGGCCGGC CTGCTCGACC TGGGCTACGT GGCGTTCTAC
GCCATCGGTG CCTACGGCCT GGCGCTGGGT TACCAGTACC TCGGCCTGGG CTTCTGGAGC
GTGCTGCCGC TGGCGGCCAT CGCTGCGGCG CTGGCGGGCT GCATCCTTGG TTTCCCGGTG
CTACGAATGC ACGGTGACTA CCTGGCGATC GTGACCCTGG GCTTTGGCGA GATTATCCGC
CTGGTGCTGA ACAACTGGCT GTCGTTCACC GGTGGCCCCA ACGGCATGCC GGCGCCTTCG
CCAACCTTCT TCGGCCTGGA GTTCGGCCGC CGGGCCAAGG ATGGCGGGGT GCCGATCCAC
GAGTTCTTCG GCTTCGAGTA CAACGCCAAC CTCAAGTTCG TGTTCATCTA CGCCGTGCTG
TTCCTGGTTG TGCTGGCCGT GCTGTACATC AAGCACCGCC TGACTCGCAT GCCGGTCGGC
CGGGCCTGGG AAGCGCTGCG CGAAGACGAA ATCGCCTGCC GTTCGATGGG CTTGAACCAC
GTGCTGGTCA AGCTTTCGGC GTTTACCTTG GGTGCCTCCA CCGCCGGCTT GGCCGGGGTG
TTCTTCGCCA CCTACCAGGG CTTCGTCAAC CCGTCGTCAT TCACCTTCTT CGAGTCGGCG
CTGATCTTGG CCATCGTCGT ACTGGGTGGC ATGGGGTCGA CCGTGGGCGT GGTCATCGCG
GCGTTCGTGC TTACAGTGGC GCCGGAGCTG CTGCGCAGCT TCTCCGAGTA CCGGGTGTTG
CTGTTCGGCG TGTTGATGGT GCTGATGATG ATCTGGCGAC CGCGTGGGCT GATCCGCATC
AGCCGTACCG GTGTGACCCC GCGTAAAGGA GTGGCGCCAT GA
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| Protein sequence | MSVAKTASVS ETKGFDIKRS LLETLVAGLL ALIVFGPVVG VVLDGYTFNA EPRRVAWLVG
GVMVGRFLLS LFLQTAPGQR MLQSFDSGGS GVHVNAPDYK SRLRYIIPAL IVIAIVFPIF
ANKYLLTVVI LGLIYVLLGL GLNIVVGLAG LLDLGYVAFY AIGAYGLALG YQYLGLGFWS
VLPLAAIAAA LAGCILGFPV LRMHGDYLAI VTLGFGEIIR LVLNNWLSFT GGPNGMPAPS
PTFFGLEFGR RAKDGGVPIH EFFGFEYNAN LKFVFIYAVL FLVVLAVLYI KHRLTRMPVG
RAWEALREDE IACRSMGLNH VLVKLSAFTL GASTAGLAGV FFATYQGFVN PSSFTFFESA
LILAIVVLGG MGSTVGVVIA AFVLTVAPEL LRSFSEYRVL LFGVLMVLMM IWRPRGLIRI
SRTGVTPRKG VAP
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