Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4918 |
Symbol | |
ID | 5872731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5485535 |
End bp | 5486302 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550054 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001671138 |
Protein GI | 167035907 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000000000155421 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.00000000000159857 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACGTCCA CCGTATTCAT CACTGGTGCC ACTTCCGGTT TCGGTGAGGC CACCGCCCGC CGCTTCGCTG AGGCTGGCTG GAAGCTGGTG CTCACTGGCC GCCGCAAGGA GCGCCTGGAC GCCCTGTGCG CCGAGCTGTC GGCAAAGACC GAAGTGCATG GCCTGGTGCT CGACGTACGT GACCGCAAGG CCATGGAGCA GGCCATCGCC AATCTGCCGG CCGGGTTCGA AAAGATTCGC GGCCTGGTCA ACAACGCCGG CCTTGCATTG GGTGTGGATG CGGCGCAGAA CTGTAGCCTG GACGACTGGG AAACCATGGT CGATACCAAC ATCAAGGGCC TGATGTACAC CACCCGGCTG CTGCTGCCAC GGCTGATCGC CCATGGCCGC GGCGCTTCGA TCCTCAACGT AGGTTCCGTG GCGGGCAACT ACCCGTACCC GGGCAGCAAC GTCTACGGTG GCACCAAGGC CTTCGTCGGC CAGTTCTCGT TGAGCCTGCG CTGCGACCTG CGCGGCACCG GCGTGCGCGT GAGCAACATC GAGCCGGGCC TGTGCGAGAG CGAGTTCTCG CTGGTGCGTT TCGGCGGTGA CCAGGCCAAG TACGACGCCA CCTACGCAGG TGCCGAGCCG ATCCAGCCGC AGGACATTGC CGAGACCATC TTCTGGATCC TTAACCAGCC GGCGCACATC AACATCAACA GCCTGGAGCT GATGCCGGTG AGTCAGGACT GGGCAGGCTT CTCGATCGAC CGGTCGGCCA AGGGCTGA
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Protein sequence | MTSTVFITGA TSGFGEATAR RFAEAGWKLV LTGRRKERLD ALCAELSAKT EVHGLVLDVR DRKAMEQAIA NLPAGFEKIR GLVNNAGLAL GVDAAQNCSL DDWETMVDTN IKGLMYTTRL LLPRLIAHGR GASILNVGSV AGNYPYPGSN VYGGTKAFVG QFSLSLRCDL RGTGVRVSNI EPGLCESEFS LVRFGGDQAK YDATYAGAEP IQPQDIAETI FWILNQPAHI NINSLELMPV SQDWAGFSID RSAKG
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