Gene PputGB1_4918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4918 
Symbol 
ID5872731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5485535 
End bp5486302 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content64% 
IMG OID641550054 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001671138 
Protein GI167035907 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000155421 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000000159857 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACGTCCA CCGTATTCAT CACTGGTGCC ACTTCCGGTT TCGGTGAGGC CACCGCCCGC 
CGCTTCGCTG AGGCTGGCTG GAAGCTGGTG CTCACTGGCC GCCGCAAGGA GCGCCTGGAC
GCCCTGTGCG CCGAGCTGTC GGCAAAGACC GAAGTGCATG GCCTGGTGCT CGACGTACGT
GACCGCAAGG CCATGGAGCA GGCCATCGCC AATCTGCCGG CCGGGTTCGA AAAGATTCGC
GGCCTGGTCA ACAACGCCGG CCTTGCATTG GGTGTGGATG CGGCGCAGAA CTGTAGCCTG
GACGACTGGG AAACCATGGT CGATACCAAC ATCAAGGGCC TGATGTACAC CACCCGGCTG
CTGCTGCCAC GGCTGATCGC CCATGGCCGC GGCGCTTCGA TCCTCAACGT AGGTTCCGTG
GCGGGCAACT ACCCGTACCC GGGCAGCAAC GTCTACGGTG GCACCAAGGC CTTCGTCGGC
CAGTTCTCGT TGAGCCTGCG CTGCGACCTG CGCGGCACCG GCGTGCGCGT GAGCAACATC
GAGCCGGGCC TGTGCGAGAG CGAGTTCTCG CTGGTGCGTT TCGGCGGTGA CCAGGCCAAG
TACGACGCCA CCTACGCAGG TGCCGAGCCG ATCCAGCCGC AGGACATTGC CGAGACCATC
TTCTGGATCC TTAACCAGCC GGCGCACATC AACATCAACA GCCTGGAGCT GATGCCGGTG
AGTCAGGACT GGGCAGGCTT CTCGATCGAC CGGTCGGCCA AGGGCTGA
 
Protein sequence
MTSTVFITGA TSGFGEATAR RFAEAGWKLV LTGRRKERLD ALCAELSAKT EVHGLVLDVR 
DRKAMEQAIA NLPAGFEKIR GLVNNAGLAL GVDAAQNCSL DDWETMVDTN IKGLMYTTRL
LLPRLIAHGR GASILNVGSV AGNYPYPGSN VYGGTKAFVG QFSLSLRCDL RGTGVRVSNI
EPGLCESEFS LVRFGGDQAK YDATYAGAEP IQPQDIAETI FWILNQPAHI NINSLELMPV
SQDWAGFSID RSAKG