Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4903 |
Symbol | |
ID | 5872716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5472000 |
End bp | 5472515 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641550039 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_001671123 |
Protein GI | 167035892 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1247] Sortase and related acyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.449893 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.00644876 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTTACG AAATCCGCGA TGCCCTGCCC ACCGACGTGC CCGGCATCCT CGACATCTAC AACGACGCCG TGCGCAACAC CACGGCGATC TGGAACGAAA CGCCGGTAGA CCTGGCCAAC CGCCAGGCCT GGTTCGAAGC GCGGGCGCAG CAGGGTTATC CGATCCTGGT CGCGGTAGAT GAGACAGGCG TGCTGGGCTA TGCCTCGTTT GGCGACTGGC GGCCGTTCGA GGGCTTTCGC CTGACCGTGG AGCACTCGGT GTATATCCGG GGTGACCAGC GCGGAAAAGG GCTGGGACCG GTGTTGATGG CAGCGCTGGT CGAGCGTGCG CGTGGTTGCG GCAAACATGT GATGGTGGCG GCCATCGAGA GTGGCAATGC GGCCTCGGTG CGCCTGCATG AGCGACTGGG CTTCGTGGTG ACCGGGCAGA TGCCGCAAGT GGGGGTGAAG TTTGGCCGCT GGCTGGATTT GACCTTCATG CAACTGGTGT TGAACCCAGG GGCCGAACCA ACCTGA
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Protein sequence | MSYEIRDALP TDVPGILDIY NDAVRNTTAI WNETPVDLAN RQAWFEARAQ QGYPILVAVD ETGVLGYASF GDWRPFEGFR LTVEHSVYIR GDQRGKGLGP VLMAALVERA RGCGKHVMVA AIESGNAASV RLHERLGFVV TGQMPQVGVK FGRWLDLTFM QLVLNPGAEP T
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