Gene PputGB1_4889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4889 
Symbol 
ID5872702 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5456535 
End bp5456972 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content63% 
IMG OID641550025 
Producthypothetical protein 
Protein accessionYP_001671109 
Protein GI167035878 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1585] Membrane protein implicated in regulation of membrane protease activity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.0908212 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAATGC AATGGTGGAT CTGGCTGGTC TTCGGCATCG CGCTGATCCT GCTCGAACTG 
GTCCTGCCGA CGTTCTTCAT CCTCTGGTTC GGCATCGGTG CCGTGTTGGT CTCGCTGATC
TCGCTCGCTG CTCCCAGCCT GCAACTGGAC ATGCAGGTGC TGCTGTGGGT ACTGCTGTCA
TCAGTCACCA CGGCGCTCTG GTTCAAGCTG TTCCGACGCA AGCAGCCAGA TGTGCGCTGG
ACCGCCGACA GCGTGATCGG CGAAGTGGGC CTGCTGACCG CTGGGGTGTC GGAGTTCCAC
AAAGGCCGTG TGCGTTTCCA GAAGCCGATT CTCGGCAACG AAGAATGGAC CTGCATCGCT
GACAGCGAAA TCCCGGCCGG CGAACGGGTG CGCCTGACCG CCATCGAGGG GAACACCGCC
CGCGTCGTCC GGGCCTGA
 
Protein sequence
MEMQWWIWLV FGIALILLEL VLPTFFILWF GIGAVLVSLI SLAAPSLQLD MQVLLWVLLS 
SVTTALWFKL FRRKQPDVRW TADSVIGEVG LLTAGVSEFH KGRVRFQKPI LGNEEWTCIA
DSEIPAGERV RLTAIEGNTA RVVRA