| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4871 |
|---|
| Symbol | prmA |
|---|
| ID | 5872684 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 5436205 |
|---|
| End bp | 5437083 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641550007 |
|---|
| Product | ribosomal protein L11 methyltransferase |
|---|
| Protein accession | YP_001671091 |
|---|
| Protein GI | 167035860 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2264] Ribosomal protein L11 methylase |
|---|
| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 46 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTGGC TGCAAGTACG CCTGGCCATC AGCCCGGAAC AAGCCGAAAC CTACGAAGAC
GCCCTGCTTG AAGTAGGCGC CGTCTCGGTC ACGTTCATGG ATGCCGAAGA TCAACCGATC
TTCGAACCCG ACCTCAACAC CACACCGCTG TGGTCGCACA CCCACCTGCT GGCCCTGTTC
GAGGCCGATG CCGACCCAGA GCAGGTGTTC GCCCACCTGC GCTTGCTGAC TGGCGCCGAG
CTGCCCGAAC ACCAAGCCGA GGTGATCGAG GACCAGGACT GGGAACGCAG CTGGATGGAC
AACTTCCAGC CGATGCGCTT CGGCCGCCGT CTGTGGATCG TGCCTAGCTG GCACGAAGCC
CCGGAAAAAG ATGCCGTCAA CCTGTTGCTC GACCCAGGCC TGGCCTTCGG TACCGGCACC
CACCCCACCA CGGCTCTGTG CCTGGAATGG CTCGACGGCC AGCAACTCGA CGGCACCCAG
GTGCTGGACT TTGGCTGCGG CTCGGGCATC CTCGCCATCG CCGCACTGCT GCTGGGCGCC
CGTGAAGCGG TAGGCACCGA CATCGACGTG CAGGCCATCG AGGCTTCGCG CGACAATGCC
CAGCGCAACG GCGTTGCCGA TGAGAAGCTG GCACTGTACC TGCCCGAGCA CATGCCAGCG
ATGCAGGCCG ACGTACTGGT CGCCAACATC CTCGCCGGCC CACTGGTGTC GCTGGCACCG
CAGTTGTCCG GCCTGGTTCG CCCAGGTGGC CTGCTGGCGC TGTCGGGTAT CCTTGCCGAG
CAGGGCGAGG AAGTAGCCGC CGCCTACGCC GCCGACTTTG ATCTGGACCC TATCGTCGTG
CGCGACGGCT GGGTGCGCAT CAGTGGTCGG CGCCGCTAA
|
|---|
| Protein sequence | MPWLQVRLAI SPEQAETYED ALLEVGAVSV TFMDAEDQPI FEPDLNTTPL WSHTHLLALF
EADADPEQVF AHLRLLTGAE LPEHQAEVIE DQDWERSWMD NFQPMRFGRR LWIVPSWHEA
PEKDAVNLLL DPGLAFGTGT HPTTALCLEW LDGQQLDGTQ VLDFGCGSGI LAIAALLLGA
REAVGTDIDV QAIEASRDNA QRNGVADEKL ALYLPEHMPA MQADVLVANI LAGPLVSLAP
QLSGLVRPGG LLALSGILAE QGEEVAAAYA ADFDLDPIVV RDGWVRISGR RR
|
|---|
| |