| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4858 |
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| Symbol | |
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| ID | 5872671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5424432 |
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| End bp | 5425442 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549994 |
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| Product | lytic murein transglycosylase B |
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| Protein accession | YP_001671078 |
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| Protein GI | 167035847 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02282] lytic murein transglycosylase B |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.080736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCAG TGCGTAACTG GGCTGCCCGT TGTGCGCCGT GGATCGGTGC GGTGGGCCTG
TTCGGCGCTG TACAGCTGGC CCATGCCGGT GATTACGAGG GCTCGCCGCA GGTAACCGAG
TTCGTTGGCG AAATGAGCCG CGACTATGGT TTTGCCCCTG AGCAACTGAT GGGCGTGTTC
CGTGAGGTAC AGCGCAAGCA GTCGATCCTC GACGCCATTT CGCGCCCGGC CGAACGGGTA
AAACCGTGGA AGGACTACCG GCCGATGTTC CTCACCGATG CGCGCATTGC CCGCGGTGTA
GATTTCTGGC GCCAGCATGA GGCGGTATTG GCGCGTGCCG AGCAGGAATA CGGCGTACCG
GCGCAGTACA TTGTCGCGAT CATCGGCGTG GAAACCTTCT TCGGCCGCAA TACCGGCAAC
TACCGCGTGA TCGACGCCCT GTCGACCTTG GGCTTCGACT ACCCGCCACG GGCCGAATTC
TTCCGCAAGG AGCTGCGCGA GTTCCTGCTG CTGGCGCGTG AGGAACAGCT CGACCCCTTG
ACGCTCAAGG GCTCGTACGC CGGCGCCATG GGCTTGCCGC AGTTCATGCC AAGCAGTTTT
CGCAACTACG CGGTGGACTT CGACGGCGAC GGTCATATCA ATATCTGGAA CAACCCGGAC
GATGCCATCG GCAGCGTGGC CAGCTACTTC AAGCGCCACG GCTGGGTGGC TGGTGAGGGT
GTGGTCAGCC GTGCCTGGAT CGAAGGTGAG CGCGCAGACG AAGGCTTGAC TACAGGCATC
GAGCCGGTGA AAACGGTAGG GGAGTTGCGC GGGCTTGGCT GGTCGGTTCA TGATTCGCTG
CGCGATGATC TGCCGGTTAC CGCCTTCCGT CTCGAGGGCG ACAACGGCCC CGAGTACTGG
ATGGGCCTGA AGAACTTCTA TGCGATCACT CGCTACAACC GCAGCGTGAT GTATGCCATG
GCGGTGCATC AGCTCGCGGA ACAGCTGGTT CAAGTACGGG GCGTCAAGTA A
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| Protein sequence | MQAVRNWAAR CAPWIGAVGL FGAVQLAHAG DYEGSPQVTE FVGEMSRDYG FAPEQLMGVF
REVQRKQSIL DAISRPAERV KPWKDYRPMF LTDARIARGV DFWRQHEAVL ARAEQEYGVP
AQYIVAIIGV ETFFGRNTGN YRVIDALSTL GFDYPPRAEF FRKELREFLL LAREEQLDPL
TLKGSYAGAM GLPQFMPSSF RNYAVDFDGD GHINIWNNPD DAIGSVASYF KRHGWVAGEG
VVSRAWIEGE RADEGLTTGI EPVKTVGELR GLGWSVHDSL RDDLPVTAFR LEGDNGPEYW
MGLKNFYAIT RYNRSVMYAM AVHQLAEQLV QVRGVK
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