Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4833 |
Symbol | |
ID | 5872646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5397808 |
End bp | 5399271 |
Gene Length | 1464 bp |
Protein Length | 487 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549969 |
Product | AMP nucleosidase |
Protein accession | YP_001671053 |
Protein GI | 167035822 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0775] Nucleoside phosphorylase |
TIGRFAM ID | [TIGR01717] AMP nucleosidase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCAAG CTTTTGTAGT CGTTGATACC CCCGAACAGG CCGTCGACCG TCTGGCGGCC CTGCATGAAC AGGCCACCGG GGCCCTTAGC CAGGCCCTCA AGCGTTACCT GAAGGACCGT ACCGAGCCGA ACGCCGAGGA GCGCGACCTG TTCCGCTACC CGGCACTGCG CCTGACCTAC ATCAGCCACG GTGAGGTCGC CGCCACCACG CGCGCCTACG CCAAGGTCCA GGTAGCCGGT ACCTACAGCG TTACCGTCAC CCAGCCTGCT GCATTTCGTG GCTACCTGCT GGAGCAACTG CGCCCGCTGA TGCACGACTA CACCGTCACG GTAGAAGTCG GCGTCAGTGA ACAGAACATC CCGTACCCCT ACGTGGTCGA TCAGGGCGAC GAGCTGGCCG GCAGCGGCAT TACCGCCGCG CAGCTGGCGC GGGTGTTCCC CAGCACCGAC CTGTCGGCCG CCACCGACAA TATCGCCGAT GGTCTGTACG ACTGGGACCG TGCCGAAGTG CTGCCGCTGG CGCTGTTCGA TGCCGCGCGG GTCGATTTCT CGCTGCGCCG CCTGGTGCAC TACACGGGCA GCGACTGGCG CCATGTGCAG CCGTGGATCC TGCTGACCAA CTACCACCGT TATGTCGACC AGTTCATCAG CCATGGCTTG GAGCAACTGC GTGACGACCC GCGCTTCGTG CGCATGGTGC TACCGGGCAA CGTGGTGATC GAAAAGGGCA TGGACCACGG CGAAACCCAG GCCCTGGTGG CCAGCGTGGT CTGGCACCGC TACCAGATGC CGGCCTACCA CCTGATCGCC GCCGACGGCG ACGGTGTTAC GTTGGTCAAC ATCGGTGTCG GCCCGTCCAA CGCCAAGAAC ATCACCGACC ACCTGGCGGT ACTGCGCCCG CACTGCTGGC TGATGATCGG CCACTGCGGT GGCCTGCGGC AGTCGCAAAC CATTGGCGAC TATGTGCTGG CCCACGCCTA CATGCGCCGC GACGGGATTC TCGACCGGGT TGTGCCGCCG AATATCCCGA TCCCGGCCTT GGCCGAAGTG CAGATGGCCT TGCAGGAAGC CGCCGCGCAG GTCACTGGCG AGCGTGGCGA ACAGCTGAAG AAGCGCCTGC GCACCGGCAC CGTGCTCACC TACGACGACC GCAACTGGGA GCTGCGCTGG GCTCAGGAAC GCCCGCTGAT CAACCTGTCG CGTGCGGTGG CGGTGGACAT GGAAAGCGGC ACCATCGCTG CCCAGGGCTA CCGATTGCGC GTGCCGTACG GCACCTTGCT GTGTGTGTCC GACAAGCCGC TGCACAGCGA GATCAAGCTG CCGGGTTCGG CCAACGCCTT CTACAACCGC GCGGTCAGCC AACACCTGAA AATCGGCATT GCTGCTCTCG ACCTGCTGCG CACCGAGCTC AACTCGCTGC ACTCGCGTAA ACTGCGCAGC TTCGATGAGC CGCCGTTCCG CTGA
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Protein sequence | MSQAFVVVDT PEQAVDRLAA LHEQATGALS QALKRYLKDR TEPNAEERDL FRYPALRLTY ISHGEVAATT RAYAKVQVAG TYSVTVTQPA AFRGYLLEQL RPLMHDYTVT VEVGVSEQNI PYPYVVDQGD ELAGSGITAA QLARVFPSTD LSAATDNIAD GLYDWDRAEV LPLALFDAAR VDFSLRRLVH YTGSDWRHVQ PWILLTNYHR YVDQFISHGL EQLRDDPRFV RMVLPGNVVI EKGMDHGETQ ALVASVVWHR YQMPAYHLIA ADGDGVTLVN IGVGPSNAKN ITDHLAVLRP HCWLMIGHCG GLRQSQTIGD YVLAHAYMRR DGILDRVVPP NIPIPALAEV QMALQEAAAQ VTGERGEQLK KRLRTGTVLT YDDRNWELRW AQERPLINLS RAVAVDMESG TIAAQGYRLR VPYGTLLCVS DKPLHSEIKL PGSANAFYNR AVSQHLKIGI AALDLLRTEL NSLHSRKLRS FDEPPFR
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