| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4780 |
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| Symbol | |
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| ID | 5872594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5346726 |
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| End bp | 5347640 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549918 |
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| Product | hypothetical protein |
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| Protein accession | YP_001671002 |
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| Protein GI | 167035771 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | [TIGR00950] Carboxylate/Amino Acid/Amine Transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.119859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCCG CCCGTCGCTT CCCGCTGTTG CTCATTGGTG CTTTCCTGGC CTTGTACCTG
GTTTGGGGTT CCACTTATCT GTTCATTCGT ATCGGCGTGG AGAGCTGGCC TCCGATGCTC
ATGGCCGGGG TGCGCTTTCT GATTGCCGGC GGCCTGCTGT ACGGTTTTTT GCGCTGGCGC
GGTGTGCCCG CGCCGACCTG GCCGCAGTGG CGGGCGGCAG GGGCGATTGG CTTTTTGCTG
CTTAGCTGTG GCAACGGTGG TGTGACCGTG GCCGAGCATG CTGGCGTGGC GTCGGGCGTA
GCGGCGCTGG CCGTGGCGAC AGTGCCACTG TTCACCCTGC TGTTCGGCCT GTTGTTCGGG
CACCGCAATT CGAAGCTGGA GTGGGCGGGC ATTGCCCTGG GGCTGGTGGG TATCGGCCTG
CTGAACCTGG GCTCCAACCT GCAGGCAAGC CCGATGGGTG CAGCGCTGAT CCTGTTCGCA
GCGGCGTCCT GGGCGTTCGG CTCGGTGTGG AGCAAAACCT TGCCGCTGCC CCAGGGGCCT
ATGGCCAGCG CGGCAGAAAT GCTGGTGGGG GGGGCGGTAC TGTTGCTGGG CAGTGTGCTG
TCGGGCGAGC GTATGACGCA GATGCCGACC GCTGCCGGCT GGGGGGCGTT GGCCTATCTG
GTGTTCTTCG GCTCGATCCT GGCGTTCAGT GCCTACATGT ATTTGCTCAA ACATGTGCGC
CCGGCAGCCG CCACCAGCTA CGCCTACGTC AACCCGGCGG TGGCGGTGCT GTTGGGCATC
GTCTTCGCCG GCGAACAGAT TGGCGCCGAA GAGTGCGTGG CGATGGCGGT GATTATCGGT
GCGGTGGTGC TGATTGGCCT TCCACAGTGG CGCAAGGCGC CTGCGCAGCC GTTGAAAGGC
GAAATCTGCA AGTAG
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| Protein sequence | MPAARRFPLL LIGAFLALYL VWGSTYLFIR IGVESWPPML MAGVRFLIAG GLLYGFLRWR
GVPAPTWPQW RAAGAIGFLL LSCGNGGVTV AEHAGVASGV AALAVATVPL FTLLFGLLFG
HRNSKLEWAG IALGLVGIGL LNLGSNLQAS PMGAALILFA AASWAFGSVW SKTLPLPQGP
MASAAEMLVG GAVLLLGSVL SGERMTQMPT AAGWGALAYL VFFGSILAFS AYMYLLKHVR
PAAATSYAYV NPAVAVLLGI VFAGEQIGAE ECVAMAVIIG AVVLIGLPQW RKAPAQPLKG
EICK
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