| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4777 |
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| Symbol | |
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| ID | 5872591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5342926 |
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| End bp | 5343840 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641549915 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_001670999 |
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| Protein GI | 167035768 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000000000599986 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCTGC CGCTGATCTA CCACGAAGAC TACAGCCCGG AGTTCCCCGC CGAACACCGC
TTCCCGATGG ACAAGTTCCG CCTGCTGCGC GACCACTTGG TCGACAGCGG GCTGACCACC
GACCAAGCCC TGCTGCGCCC GGACATCTGC CCCAACGACA TCCTCGCCCT GGCCCACGAC
CGCAGCTACA TCGAGCGCTA CATGAACGGC GAGCTGTCGC GCGAGGACCA GCGCCGCCTC
GGCCTGCCCT GGAGCGAGGC GCTGGCCCGG CGCACCGTGC GCGCCGTCGG CGGCTCGCTG
CTCACGGCCG AAATGGCCCT GCAGCACGGC ATCGCCTGCC ACCTCGCCGG TGGCACCCAC
CATGCCCATT ACGACCACCC CGCCGGCTTC TGCATCTTCA ACGACCTCGC GGTGATCAGC
CGTTACCTGC TGGCGGCTGG CCGGGTACAC CGGGTGCTGA TTTTCGACTG CGACGTGCAC
CAGGGCGATG GCACCGCGCG CATCCTGCAC GACACGCCAG AGGCCATCAC CGTGTCGCTG
CACTGCGAGC AGAACTTCCC GGCCCGCAAG GCGCAAAGCG ACTGGGATAT CCCCCTGCCC
CGTGGCATGG GCGATACCGC CTACCTGAAG GTGGTGGACG ACGCCCTCAA TTACCTGCTG
CCGTTGTATC AGCCCGACCT GGTGCTGTAT GACGCCGGCG TCGATGTGCA CAAAGACGAC
GCCTTGGGCT ACCTGCAACT GACCGATGCT GGCGTTGCCG CCCGTGACGA AGCCGTATTG
CGCCACTGCC TGGGCCGCGA TATCCCGGTG GTGGGCGTGA TCGGCGGTGG TTACAGCAAG
GACCGCGCAG CCTTGGCCAA ACGCCACGGC ATCCTTCACC ACAGCGCAGC ACGCGTCATC
GGTTGTTCAC AATGA
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| Protein sequence | MPLPLIYHED YSPEFPAEHR FPMDKFRLLR DHLVDSGLTT DQALLRPDIC PNDILALAHD
RSYIERYMNG ELSREDQRRL GLPWSEALAR RTVRAVGGSL LTAEMALQHG IACHLAGGTH
HAHYDHPAGF CIFNDLAVIS RYLLAAGRVH RVLIFDCDVH QGDGTARILH DTPEAITVSL
HCEQNFPARK AQSDWDIPLP RGMGDTAYLK VVDDALNYLL PLYQPDLVLY DAGVDVHKDD
ALGYLQLTDA GVAARDEAVL RHCLGRDIPV VGVIGGGYSK DRAALAKRHG ILHHSAARVI
GCSQ
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