| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4766 |
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| Symbol | |
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| ID | 5872580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5331817 |
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| End bp | 5333172 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641549904 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_001670988 |
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| Protein GI | 167035757 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATGC AGACCAACCC AGCCGTTCAC ACCAGCACCC CGGTGGTCAC CGACCTGCGC
GTGATCCCCG TCGCCGGCCA TGACAGCATG CTGCTCAACC TCAGTGGCGC CCATGGCCCG
TACTTCACCC GCAACGTGGT GGTGCTGCGC GACAGCGCCG GCAACACCGG CCTTGGCGAA
GTGCCCGGCG GCGAGAAGAT TCGCCAAACC TTGGAGGACG CCCGCAGCCT GGTGGTCGGC
CAGCCAATCG GCCATTACCA GCGTGTGCTC AATGCCATGC GCCAGACCTT CGCCAACCGC
GACTCGGCCG GCCGTGGCCT GCAAACCTTC GACCTGCGCA TCACCGTGCA CGCGGTGACC
GCCATCGAGT CGGCGCTGCT CGACCTGCTC GGCCAGCATC TGAACGTGCC GATGGCGGCA
CTGCTGGGCG AGGGGCAGCA ACGCGATGCA GTGAAGATGC TCGGTTACCT ATTCTATATC
GGCGACCGTC AGCAGACCGA CCTGGCTTAC CGCAACGAAA CCGATAGCGA TGAAGACTGG
TTCCGCCTGC GTCACGAAAA GGCGCTGACC ACAGAGACGG TGGTACGTCT GGCCGAGGCC
GCCAAGGCGC GTTATGGCTT CAGCGACTTC AAGCTCAAGG GCGGGGTATT GCGCGGCGAA
GAAGAGATGG AAGCGGTAAC GGCCTTGGCC GAGCGCTTCC CCGAAGCGCG CATCACTCTT
GACCCGAACG GCGCCTGGTC ATTGCAAGAG GCCATTGCCC TGTGTCGCGA CAAGCACGGC
GTGCTGGCCT ACGCCGAAGA CCCGTGCGGT GCCGAGAACG GTTACTCGGG CCGTGAAGTG
ATGGCCGAGT TCCGCCGCGC CACTGGTCTG CCCACCGCCA CCAACATGAT CGCCACCGAC
TGGCGACAGA TGGGCCATGC CATCCAGTTG CAGTCGGTAG ACATCCCGCT GGCCGACCCG
CACTTCTGGA CTTTGCAGGG TTCGGTGCGG GTGGCGCAGA TGTGCAACGA CTGGGGGCTG
ACCTGGGGTT CCCACTCCAA CAACCACTTC GACATTTCGC TGGCGATGTT CACTCAGGTG
GCGGCTGCGG CGCCGGGTGA GATCACCGCC ATCGACACCC ATTGGATCTG GCAGGACGGC
CAACGCCTGA CCCGCGAGCC GCTGCGTATT GTCGACGGGC ATGTGCGGGT GCCGGCGCGG
CCAGGGCTGG GGGTGGAGTT GGATGAAGAC CAACTGGCCA AGGCGCATGA GTGCTACCGC
AACATGGGCC TTGGCGCGCG GGATGACAGC GTGGCGATGC AGTACCTGAT ACCGGGGTGG
TGCTTCGATA ACAAGCGGCC TTGCCTGGTG CGTTAA
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| Protein sequence | MNMQTNPAVH TSTPVVTDLR VIPVAGHDSM LLNLSGAHGP YFTRNVVVLR DSAGNTGLGE
VPGGEKIRQT LEDARSLVVG QPIGHYQRVL NAMRQTFANR DSAGRGLQTF DLRITVHAVT
AIESALLDLL GQHLNVPMAA LLGEGQQRDA VKMLGYLFYI GDRQQTDLAY RNETDSDEDW
FRLRHEKALT TETVVRLAEA AKARYGFSDF KLKGGVLRGE EEMEAVTALA ERFPEARITL
DPNGAWSLQE AIALCRDKHG VLAYAEDPCG AENGYSGREV MAEFRRATGL PTATNMIATD
WRQMGHAIQL QSVDIPLADP HFWTLQGSVR VAQMCNDWGL TWGSHSNNHF DISLAMFTQV
AAAAPGEITA IDTHWIWQDG QRLTREPLRI VDGHVRVPAR PGLGVELDED QLAKAHECYR
NMGLGARDDS VAMQYLIPGW CFDNKRPCLV R
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