| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4746 |
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| Symbol | |
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| ID | 5872560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5304732 |
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| End bp | 5306126 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641549884 |
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| Product | restriction endonuclease EcoRII |
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| Protein accession | YP_001670968 |
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| Protein GI | 167035737 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00392459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGA TGAAACACTC GACGGCTTTT GTACCCGATC TCTTCACTGA ACCAGAGGCC
GAGGCCTCGG ATTTTCTGAC TTCCCTCCTG GACAAGAGCG ATTCGCTCTA TGTCAAGAAG
CTGTCAGTGA ACGATCGGGA CTGGGCTCGT TTGTCGAACA AGCGTCAGGC TGGAATTTAC
GTGCCTTCGA CCGAGAGGGA CGGAAACTTC TTTCCGCCGC TGGCGACAAA GGAGCGCGAC
AAGGCTGAGG CTGCTGAGAT TCGCGAAACC TATTTTGAGA TCGAATGGCC TACCGTCGGG
CAAGTAAAGC GGGCTAGGCT TGTCCACTAC ACGAGCAAGG GGGAGGAGAC TCATCTCACC
GGTCTACCGA AGCCACCGTT TCGCGACGCT CCTCCTGCCT CTTTACTCGT TGTAGGGAAG
AGCGGCGGAC GGTACAAGGC TTTGGTCGTC GACTCTGAGA GCGATGAATA TGAAGTCGTC
CACGACGTTC TTTCTCTGCC TCCCGACTTC CACTCGGAAA TATTCATCAC GACCGTGGTC
CGACGGGAGC GGGAGGAGAA GACCGTCTCG TTCATCGAAG AAGTCGTTAG GGCATTTTTC
GATGGAACCT TCCCTGAACT CGCTTCTCGA TACGGCGCGA TGCCGACGAC CTCGGAATTG
GCTGCCGCTG CTCGTAATCG TTATCTGGGT GAGAACAGGT TGAGGAGCTT GGATCCATAT
GCCATGTGCA AGCCCGGCGA CGCTCTGCGG GCTATCAGTC GTGGACTCGA ATACGAAATT
TTCAAGGACT ATCAGATCAA AGCTAGGTCC ATCGATTTGG CTCGGATGAT TCTAGGGGAT
GATCCTAGTA AGGCGAGCCT CGAAAGAGTC CTGCGGGCCG TCGTGCTCGA CTTCCCTAAG
ATCGACGCTC TGTTGCTCTC TGCTGCACAG CAGAGGAAGT CCCGCGCCGG CTATTCCTTC
GAGCATCACA TCGACGCGAT GTTGGCAGAC GCCGGGGTCC CGTTTGAGAA GCAGGTTGTG
CTCGAAGCTA GGAAGCGTCC AGACTTTATC CTACCGAGTA AGGCTATGTA CGAGAGCTCT
ACTCGCCAGC ACTGCGAGGC ACTTGTTCTA AGCGCGAAGA CTACTCTTCG CGAGCGATGG
AAACAGGTCA AAGGGGAGAT GAGAGACTGC GATCTCTACC TCGCCACTGT GGATGAGAGT
ATAGCTGTGA ACGCGATCAA AGATATGGCC TCTCAGGGCA TCAGACTCGT TGTCCCCGAG
AGCCTGAAGA GCTCAGATAC CACTGAATAC AAAGCTCAGG ACAGTGTGCT CTCATTCAAG
GACTTTTTCG AAAATGACAT CGCTGCGAGA AGAAAGCTCT GGATTGCCAA CGGCATCTTC
GCGACCGGGG TGTGA
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| Protein sequence | MAKMKHSTAF VPDLFTEPEA EASDFLTSLL DKSDSLYVKK LSVNDRDWAR LSNKRQAGIY
VPSTERDGNF FPPLATKERD KAEAAEIRET YFEIEWPTVG QVKRARLVHY TSKGEETHLT
GLPKPPFRDA PPASLLVVGK SGGRYKALVV DSESDEYEVV HDVLSLPPDF HSEIFITTVV
RREREEKTVS FIEEVVRAFF DGTFPELASR YGAMPTTSEL AAAARNRYLG ENRLRSLDPY
AMCKPGDALR AISRGLEYEI FKDYQIKARS IDLARMILGD DPSKASLERV LRAVVLDFPK
IDALLLSAAQ QRKSRAGYSF EHHIDAMLAD AGVPFEKQVV LEARKRPDFI LPSKAMYESS
TRQHCEALVL SAKTTLRERW KQVKGEMRDC DLYLATVDES IAVNAIKDMA SQGIRLVVPE
SLKSSDTTEY KAQDSVLSFK DFFENDIAAR RKLWIANGIF ATGV
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