| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4740 |
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| Symbol | |
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| ID | 5872554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5298977 |
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| End bp | 5300233 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641549878 |
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| Product | integrase family protein |
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| Protein accession | YP_001670962 |
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| Protein GI | 167035731 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0582] Integrase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCGCAC AAGCTACCCG TCTCTCTGAA CTCAAAGTCA AATCTGCCAA GCCTGCTGAA
AAGGACTACG TCCTATTTGA TGGCGGCGGA CTTCAAATGC GAGTGAGAAG CAATGGCTCT
AAGCTATGGA ACTTCAATTA CCGACACCCT GTGACGAAGA AGCGGATCAA CATGGGACTG
GGAACCTTCC CCGAAGTCTC GTTGGCGCAA GCACGTAAGA GTTCCGTTGA AGCGAGGGAA
GCACTTGCCC ACGGCATAGA CCCTAAAGAG AAACGGGATG CTGTGCTGCA AGCTAAACAA
GCTGCGACTG AGCACACACT CCAGAATGTG GCGACGTCCT GGTATGAACT GAAGAAGGAT
GGTGTGACGC CGGCCTACGC TGAGGACATC TGGCGCTCGC TAACATTGCA CATATTCCCG
GACTTGGGCT CCACACCGAT CTCAGCCATC CGCGCACCGC AAGTCATCAA TCTGCTCCGA
CCACTCGAAA CCAAGGGTAG CCTTGAAACA GTGAAGCGAC TGACGCAGCG GCTCAACGAG
ATCATGACCT ACGGGGTCAA CTCGGGACTG ATTCACGCGA ACCCGCTCAG CGGTATCCGC
TCCGTCTTCA AGAAACCGAA AAAGAAAAAC ATGGCGGCTC TACCCCCCGA TGAGCTGAAA
GAACTCATGG TGGCAATCGC CAATGCCAGC ATAAAAAGAA CAACCCGCTG CCTGATCGAG
TGGCAGCTCC ACACCATGAC CCGGCCAGTC GAGGCAGCAA CCACTCGCTG GGCAGATATC
GACATCGAGA AGAAGATCTG GACGATCCCT GCGGAGCGCA TGAAGAAACG CCGAACGCAC
ATTGTCCCGC TCACGGAGCA GTCTCTCGCG CTCCTGGAAG CGATCAAGCC CTACAGTGGA
CATAGGGAGT ATGTGTTCCC CGCAGACCGA AACCCTCGTA CCCACTGCAA CAGCCAAACC
GCCAATATGG CACTGAAACG CATGGGTTTC GAAGGGCGCC TGGTAAGCCA TGGGATGCGC
TCTATGGCGA GCACCATCCT CAACGAGCAC GGCTGGGATC CTGAATTGAT CGAGGTTGCG
CTTGCCCACG TCGATAAAGA CGAGGTACGT AGCGCGTACA ATCGAGCAGA TTACATAGAA
CGCAGACGCC CCATGATGGC GTGGTGGAGC GACCACATCC AGGAAGCTGC TACAGGCAAC
CTGTCGGTGT CAGCCATAAG AGAAAATCAA GATAAAAAAG TCATCTCGAT ACGTTGA
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| Protein sequence | MCAQATRLSE LKVKSAKPAE KDYVLFDGGG LQMRVRSNGS KLWNFNYRHP VTKKRINMGL
GTFPEVSLAQ ARKSSVEARE ALAHGIDPKE KRDAVLQAKQ AATEHTLQNV ATSWYELKKD
GVTPAYAEDI WRSLTLHIFP DLGSTPISAI RAPQVINLLR PLETKGSLET VKRLTQRLNE
IMTYGVNSGL IHANPLSGIR SVFKKPKKKN MAALPPDELK ELMVAIANAS IKRTTRCLIE
WQLHTMTRPV EAATTRWADI DIEKKIWTIP AERMKKRRTH IVPLTEQSLA LLEAIKPYSG
HREYVFPADR NPRTHCNSQT ANMALKRMGF EGRLVSHGMR SMASTILNEH GWDPELIEVA
LAHVDKDEVR SAYNRADYIE RRRPMMAWWS DHIQEAATGN LSVSAIRENQ DKKVISIR
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