| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4735 |
|---|
| Symbol | |
|---|
| ID | 5872548 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | - |
|---|
| Start bp | 5290896 |
|---|
| End bp | 5291663 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641549873 |
|---|
| Product | GntR domain-containing protein |
|---|
| Protein accession | YP_001670957 |
|---|
| Protein GI | 167035726 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2186] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTTG ATCAGGTCCG CCAACGGCGC CTGTCCGACG ACATTGTCGA TCGGTTGGAA
GGGATGATTC TGGAAGGCAC GCTGACCTCG GGGCAGCGGC TGCCGGCCGA GCGCGTCCTT
GCCGAGCAAT TTGGTGTGTC CCGCCCGTCA CTGCGTGAGG CGATCCAGAA GCTGGTGGCC
AAAGGGCTGC TGGTCAGCCG TCAGGGCGGG GGCAATTTTG TTGCCGAGTC GCTGGGGTCC
ACCTTCAGCG ACCCATTGCT GCAGTTGCTC GAGCACAGTG CTGAGGCGCA GCGTGACCTG
CTCGAATTCC GCCATACCCT GGAGGCGTCC TGTGCCTACT ATGCTGCCCA GCGTGCCACC
GAGCCTGACC GAGCGCGGTT GAAGGCGGCC TTCGATGTGT TGCAGGACTG CTATGCCAGG
GTCGACGAAG TGACTCGGGC GGAGGAGGGC GCGGCGGATG CACGCTTCCA CCTGGCGATT
GCCGAGGCCA GCCATAACGC AGTGTTGCTG CATACCATTC GGGGGTTGTT CGACCTGCTC
AAGCGCAACG TGGTGACTAA CATTGGCGGC ATGTACCAGC AGCGCACCGA AACCCGGGAC
ATGCTGATCA GTCAGCACCG GGAGCTGTAC CTGGCGATTG TCGAGGGCAG GGCGGAGGAT
GCGCGCGAGG TGTCCAGCCG GCACATTCTG TATGTGCAGG AGGTGCTGCA AGAGGCGCAC
GAAGAGGCGC AGCGGGTGGC GCGGGCAGAG CGGCGTAGCG GGCGTTGA
|
|---|
| Protein sequence | MVFDQVRQRR LSDDIVDRLE GMILEGTLTS GQRLPAERVL AEQFGVSRPS LREAIQKLVA
KGLLVSRQGG GNFVAESLGS TFSDPLLQLL EHSAEAQRDL LEFRHTLEAS CAYYAAQRAT
EPDRARLKAA FDVLQDCYAR VDEVTRAEEG AADARFHLAI AEASHNAVLL HTIRGLFDLL
KRNVVTNIGG MYQQRTETRD MLISQHRELY LAIVEGRAED AREVSSRHIL YVQEVLQEAH
EEAQRVARAE RRSGR
|
|---|
| |