Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4716 |
Symbol | tpiA |
ID | 5872529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 5270056 |
End bp | 5270811 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641549854 |
Product | triosephosphate isomerase |
Protein accession | YP_001670938 |
Protein GI | 167035707 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGCC CTATGGTAGC TGGTAACTGG AAGATGCACG GTACCCGCGC TAGCGTCGCT GAGCTGACCG AAGGCTTGAG CAATCTCGCC TTGCCGAGCG GAGTGGAAGT CGCGGTATTT CCACCAGCCC TGTTCATCAA TCAAGTGATC GATGGCTTGG CGGGTAAAGA AATTACTGTC GGCGCACAGA ATTCTGCTGT ACAACCCGAA CAGGGTGCGC TGACCGGGGA AGTTGCTCCG GAGCAGCTGG TTGAAGCAGG TTGCAAGTTG GTGTTGATTG GTCACTCGGA GCGTCGCCAA GTCATTGGTG AAACCGACGA AGTGCTCAAT CGCAAGTTTG CAGCGGCCCA GGCCAAAGGT TTGAAGCCAG TGCTTTGCAT CGGGGAAACC CTTGAAGAGC GCGAGGCTGG CAAAACGCTT GAAGTTGTCG GGCGTCAACT AAGCAGTATC ATCGAAGCAT TCGGTGTTAA GGCTTTTGCC AATGCAGTAA TCGCCTATGA GCCTGTATGG GCCATCGGCA CTGGCCTTAC GGCCACGCCA CAGCAGGCCC AGGATGTGCA CGCCGCCATC CGCGGCCAGC TGGCGGCAGA AGATGCTGAA GTAGCTGCGA AGGTGCAGTT GCTCTACGGC GGCAGCGTGA AGGCGGCCAA TGCGGCCGAA CTGTTCGGCA TGCCGGATAT CGATGGGGGT CTCATTGGTG GGGCTTCCCT GAACGCAGAC GAATTCGGTG CAATTTGTCG CGCCGCAGGA AACTGA
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Protein sequence | MRRPMVAGNW KMHGTRASVA ELTEGLSNLA LPSGVEVAVF PPALFINQVI DGLAGKEITV GAQNSAVQPE QGALTGEVAP EQLVEAGCKL VLIGHSERRQ VIGETDEVLN RKFAAAQAKG LKPVLCIGET LEEREAGKTL EVVGRQLSSI IEAFGVKAFA NAVIAYEPVW AIGTGLTATP QQAQDVHAAI RGQLAAEDAE VAAKVQLLYG GSVKAANAAE LFGMPDIDGG LIGGASLNAD EFGAICRAAG N
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