Gene PputGB1_4716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4716 
SymboltpiA 
ID5872529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5270056 
End bp5270811 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content58% 
IMG OID641549854 
Producttriosephosphate isomerase 
Protein accessionYP_001670938 
Protein GI167035707 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCGCC CTATGGTAGC TGGTAACTGG AAGATGCACG GTACCCGCGC TAGCGTCGCT 
GAGCTGACCG AAGGCTTGAG CAATCTCGCC TTGCCGAGCG GAGTGGAAGT CGCGGTATTT
CCACCAGCCC TGTTCATCAA TCAAGTGATC GATGGCTTGG CGGGTAAAGA AATTACTGTC
GGCGCACAGA ATTCTGCTGT ACAACCCGAA CAGGGTGCGC TGACCGGGGA AGTTGCTCCG
GAGCAGCTGG TTGAAGCAGG TTGCAAGTTG GTGTTGATTG GTCACTCGGA GCGTCGCCAA
GTCATTGGTG AAACCGACGA AGTGCTCAAT CGCAAGTTTG CAGCGGCCCA GGCCAAAGGT
TTGAAGCCAG TGCTTTGCAT CGGGGAAACC CTTGAAGAGC GCGAGGCTGG CAAAACGCTT
GAAGTTGTCG GGCGTCAACT AAGCAGTATC ATCGAAGCAT TCGGTGTTAA GGCTTTTGCC
AATGCAGTAA TCGCCTATGA GCCTGTATGG GCCATCGGCA CTGGCCTTAC GGCCACGCCA
CAGCAGGCCC AGGATGTGCA CGCCGCCATC CGCGGCCAGC TGGCGGCAGA AGATGCTGAA
GTAGCTGCGA AGGTGCAGTT GCTCTACGGC GGCAGCGTGA AGGCGGCCAA TGCGGCCGAA
CTGTTCGGCA TGCCGGATAT CGATGGGGGT CTCATTGGTG GGGCTTCCCT GAACGCAGAC
GAATTCGGTG CAATTTGTCG CGCCGCAGGA AACTGA
 
Protein sequence
MRRPMVAGNW KMHGTRASVA ELTEGLSNLA LPSGVEVAVF PPALFINQVI DGLAGKEITV 
GAQNSAVQPE QGALTGEVAP EQLVEAGCKL VLIGHSERRQ VIGETDEVLN RKFAAAQAKG
LKPVLCIGET LEEREAGKTL EVVGRQLSSI IEAFGVKAFA NAVIAYEPVW AIGTGLTATP
QQAQDVHAAI RGQLAAEDAE VAAKVQLLYG GSVKAANAAE LFGMPDIDGG LIGGASLNAD
EFGAICRAAG N