Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4660 |
Symbol | |
ID | 5872468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5198606 |
End bp | 5198950 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641549793 |
Product | protein of unknown function DUF861 cupin_3 |
Protein accession | YP_001670882 |
Protein GI | 167035651 |
COG category | [R] General function prediction only |
COG ID | [COG3450] Predicted enzyme of the cupin superfamily |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 0.894659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.844315 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCGATT TCATCACCGT CCTGCGCGAA ACCTGCCCGA CGCCGGTCGT GGACGCCACC AAGTGGAAGC GCATCGGCGG CGATCCGCAC ACCGTCAACC TCAATGCCTA CCTGTCTGCC GACGGCAGCA AGATCATGGG CACCTGGATC TGCACCCCAG GCAAGTTCGA GGTCAACTAC GAGAAGTGGG AGTTCTGCCA CTTCCTCGAT GGCTACTGCA TCATCACCCC GGAAGGCGAA GAGCCGAAAC ACCTGAAAGC GGGTGATGTG TTCGTGATCG AACCTGGGAT GAAAGGTACC TGGGAAGTGG TCGAGACCGT GCGCAAGTAT TTCGTCTTTG CCTGA
|
Protein sequence | MSDFITVLRE TCPTPVVDAT KWKRIGGDPH TVNLNAYLSA DGSKIMGTWI CTPGKFEVNY EKWEFCHFLD GYCIITPEGE EPKHLKAGDV FVIEPGMKGT WEVVETVRKY FVFA
|
| |