| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4649 |
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| Symbol | |
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| ID | 5872457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 5186986 |
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| End bp | 5188071 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549782 |
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| Product | tRNA (uracil-5-)-methyltransferase |
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| Protein accession | YP_001670871 |
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| Protein GI | 167035640 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR02143] tRNA (uracil-5-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGCTG CTTTCGACCC CTCCTCCTAC GCCACCCAGC TGGACGCCAA GGTGGCCCGG
CTGCGCGAGC TGCTGGCGCC GTTCGGCGCG CCGGAGCCGG CCGTTTTCGA CTCGCCGCGC
GAGCACTACC GCCTGCGCGC CGAATTCCGC CTGTGGCGCG AGGATGGCCA GCGCCACTAT
GCCATGTTTG CCCAGGGCGA TAAGCACAAG GCGATCTTGA TCGACGATTT CCCCATTGCC
AGCCAGCGCA TCAATGCCCT GATGCCGCGC CTGAAGGCGG CTTGGCAGGC CAGCGAGGAA
CTGGGCAACC GCCTGTTCCA GGTGGAGTTC CTCACCACCC TGGCTGGCGA TGCGATGATC
ACGATGTGCT ACCACCGCCC GCTGGACGAG GCATGGGAAG TGGAAGCGCG GCAACTGGCT
GAAGCGCTGG GCGTAAGCGT CATTGGCCGC TCCAAGGGCA AGCGCCTGGT GATCGGCCGC
GACTACGCGA TTGAAGAACT CGACGTGGCC GGCCGTGTGT TCAGCTACCG CCAACCGGAA
GGCGCGTTCA CCCAACCCAA CGGTGCGGTG AACCAGAAGA TGCTCAGTTG GGCCTTCGAG
GCCATCGGTG AGCGTGAGGA CGACCTGCTG GAGCTGTACT GCGGCAACGG CAACTTCACC
CTGCCGCTGG CTACCCGTGT GCGCCAGGTG CTGGCCACCG AAATCAGCAA GACATCGGTC
AATGCCGCGT TGAGCAACCT CGACGAGAAC GCTGTGGATA ACGTGCGGCT GGTGCGGTTG
TCGGCAGAGG AGCTGACCCA GGCGCTGAAT GAGGTGCGAC CCTTCCGTCG ACTGGAAGGC
ATCGACCTGA AAAGTTATGA GTTCGGTACC GTGTTCGTCG ACCCGCCGCG GGCGGGGATG
GACCCGGATA CCTGCGAGCT GACCCGGCGC TTCGAGCGGA TCCTGTACAT CTCGTGCAAC
CCGGAAACGC TGGCGGCAAA CATTGCCCAG TTGCAGGACA CGCACCGTAT CGAGCGGTGT
GCGTTGTTTG ACCAGTTCCC CTATACCCAC CATATGGAGA GCGGGGTTCT ACTGGTCAGG
CGCTGA
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| Protein sequence | MSAAFDPSSY ATQLDAKVAR LRELLAPFGA PEPAVFDSPR EHYRLRAEFR LWREDGQRHY
AMFAQGDKHK AILIDDFPIA SQRINALMPR LKAAWQASEE LGNRLFQVEF LTTLAGDAMI
TMCYHRPLDE AWEVEARQLA EALGVSVIGR SKGKRLVIGR DYAIEELDVA GRVFSYRQPE
GAFTQPNGAV NQKMLSWAFE AIGEREDDLL ELYCGNGNFT LPLATRVRQV LATEISKTSV
NAALSNLDEN AVDNVRLVRL SAEELTQALN EVRPFRRLEG IDLKSYEFGT VFVDPPRAGM
DPDTCELTRR FERILYISCN PETLAANIAQ LQDTHRIERC ALFDQFPYTH HMESGVLLVR
R
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