| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4638 |
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| Symbol | |
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| ID | 5872446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5175770 |
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| End bp | 5177140 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549771 |
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| Product | DNA repair protein RadA |
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| Protein accession | YP_001670860 |
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| Protein GI | 167035629 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1066] Predicted ATP-dependent serine protease |
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| TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.854791 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGG CCAAGCGCTT GTATGGCTGC ACCGAGTGCG GCGCGACCTT CCCCAAATGG
GCCGGCCAGT GCGGCGAATG CGGGGCCTGG AACACGCTGG TCGAAACCAT GATCGAAAGC
GGCGGCGCCG CAGCGCCCAG CAGCGGCCGC GCGGGTTGGA CCGGGCAGCA GGCACAGATC
AAGACCTTGG CCGAAGTCAG CGTCGAAGAA ATCCCGCGCT TCACCACCAG CAGTACTGAA
CTGGACCGCG TACTGGGCGG TGGCCTGGTG GATGGCTCTG TGGTGCTGAT TGGTGGTGAC
CCCGGTATCG GCAAGTCGAC CATTTTGTTG CAAACGTTGT GCAACATCGC CGTCGGCATG
CCGGCGCTGT ATGTCACCGG TGAGGAGTCG CAGCAACAGG TTGCCATGCG CTCACGGCGG
CTGGGCCTGC CCCAGGACCA GCTCAAGGTA ATGACCGAAA CCTGCATCGA GACCATCATC
GCTACGGCAC GCGTCGAGAA ACCCAGGGTG ATGGTGATCG ACTCGATCCA GACGATTTTC
ACCGAGCAGC TGCAATCGGC CCCCGGCGGC GTGGCCCAGG TGCGCGAAAG CACGGCGTTG
CTGGTGCGTT ACGCCAAGCA GAGCGGCACG GCGATCTTCC TGGTCGGCCA CGTGACCAAG
GAAGGCTCGC TGGCCGGCCC GCGGGTACTG GAGCACATGG TCGATACCGT GCTGTATTTC
GAAGGCGAGT CCGATGGCCG TCTGCGCTTG TTACGGGCGG TGAAGAACCG TTTTGGCGCG
GTCAACGAGC TGGGCGTGTT CGGCATGACC GACCGTGGTC TTAAAGAAGT GTCCAACCCG
TCGGCGATCT TCCTCAACCG TACCCAGGAA GAAGTGCCAG GCAGCGTGGT AATGGCTACC
TGGGAGGGCA CCCGGCCAAT GCTGGTTGAA GTGCAGGCGC TGGTCGACGA TAGCCATCTG
GCCAATCCGC GGCGGGTAAC CCTGGGCCTG GACCAGAACC GCCTGGCCAT GTTGCTGGCG
GTGCTGCACC GTCATGGCGG TATTCCTACC CATGACCAGG ACGTGTTCCT CAACGTGGTG
GGTGGGGTGA AGGTGCTGGA AACGGCTTCG GACCTGGCGC TGCTGGCGGC GGTCATGTCC
AGCCTGCGCA ATCGGCCGCT GGCCCATGGT CTGCTGGTGT TTGGCGAGAT CGGCCTGTCG
GGTGAGGTGC GGCCGGTGCC CAGTGGCCAG GAGCGCTTGA AGGAAGCGGC CAAGCACGGC
TTCAAGCGGG CCATCGTGCC CAAGGGCAAT GCGCCGAAAG AGCCACCGGC GGGGTTGCAG
GTGATTGCCG TGACCCGGCT GGAGCAAGCC CTGGATGCAT TGTTCGAGTA A
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| Protein sequence | MAKAKRLYGC TECGATFPKW AGQCGECGAW NTLVETMIES GGAAAPSSGR AGWTGQQAQI
KTLAEVSVEE IPRFTTSSTE LDRVLGGGLV DGSVVLIGGD PGIGKSTILL QTLCNIAVGM
PALYVTGEES QQQVAMRSRR LGLPQDQLKV MTETCIETII ATARVEKPRV MVIDSIQTIF
TEQLQSAPGG VAQVRESTAL LVRYAKQSGT AIFLVGHVTK EGSLAGPRVL EHMVDTVLYF
EGESDGRLRL LRAVKNRFGA VNELGVFGMT DRGLKEVSNP SAIFLNRTQE EVPGSVVMAT
WEGTRPMLVE VQALVDDSHL ANPRRVTLGL DQNRLAMLLA VLHRHGGIPT HDQDVFLNVV
GGVKVLETAS DLALLAAVMS SLRNRPLAHG LLVFGEIGLS GEVRPVPSGQ ERLKEAAKHG
FKRAIVPKGN APKEPPAGLQ VIAVTRLEQA LDALFE
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