Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4637 |
Symbol | |
ID | 5872445 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5174145 |
End bp | 5175662 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641549770 |
Product | xanthine permease |
Protein accession | YP_001670859 |
Protein GI | 167035628 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease [TIGR03173] xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACGT CCCCTAGCAC GTCTCCCGCC AAGCGCCCCG AGGATGAAAA CCTCGGCCTT GGTGCCAACC TGGCTTATGG TCTGCAGCAT GTGTTGACCA TGTACGGGGG GATCGTCGCG GTACCCCTGA TCCTGGGGCA GGCCGCGGGC CTGAACGGTG CCGAAATCGG CATGCTGATC GCCGCCTCGC TGTTTGCCGG TGGCCTGGCC ACCCTATTGC AAACCCTTGG CCTGCCGTTC TTCGGCTGCC AGTTGCCGCT GGTGCAGGGC GTGTCGTTCG CCGGTGTGGC GACCATGGGT GCGATCCTCA GCAGCGAGGG CGGCGGTGGC CTGCCTGGCG TGCTTGGCGC GGTCATGGCG GCGTCGCTGA TCGGCTTCCT GATCACCCCG GTGTTCTCGC GCATCACCAA GTTCTTCCCT CCCCTGGTGA CCGGCATCGT CATCACCACC ATCGGCCTGA CCCTGATGCC AGTGGCCGCA CGCTGGGTGA TGGGTGGCAA CAGCGCCTCG CCAGAGTTCG GCAGCGTGGC CAACATCGGC TTGGCCGGGT TGACCTTCGC CATCGTGCTG CTGCTGAGCA AGCTGGGCAG CGCGACCATT TCGCGCCTGT CGATCCTGCT GGCCATGGTG ATCGGCACAC TGATCGCCTG GTCGCTGGGC ATGGCCGACT TCAGCAAGGT CACCGAAGGC CCGATGCTGG CCTTCCCCAC GCCGTTCCAC TTCGGCATGC CGGAGTTTCA CATCGCCGCG ATCCTGTCGA TGTGCATCGT GATCATGGTA ACCCTGGTGG AAACTTCGGC CGACATCCTC GCCGTGGGTG AAATCATCGA CACCAAGGTT GACTCCAAGC GCCTGGGCAA CGGCCTGCGT GCCGACATGG CATCGAGCAT CCTGGCGCCG ATCTTCGGCT CGTTCACCCA GAGCGCGTTC GCCCAGAACG TCGGCCTGGT GGCCGTGACC GGGGTCAAGA GCCGCTACGT GGTGGCCACC GGTGGTGTGA TTCTGGTGGT ACTCGGCCTG CTGCCGATCA TGGGCCGGGT GATTGCCGCC GTGCCTACCC CGGTACTGGG TGGCGCTGGC ATCGTGCTGT TCGGCACCGT GGCGGCCAGC GGTATCCGTA CTTTGTCCAA GGTCAGCTAC AAGAACAACG TCAACCTGAT CATCGTCGCG GCCTCGCTGG GCTTCGGCAT GATCCCGATT GCCGCGCCGA CCTTCTACCA CCACTTCCCG AACTGGTTCG AGACCATCTT CCACTCGGGC ATCAGCTCGG CGGCGATCAT GGCCATCTTG CTGAACCTGA TCTTCAACCA CTTCACCACC GGCAACTCGG AAAACCAGTC GGTGTTCGCT GCGGCGTACG AGCGCACCAT CCAGTATTCG GACATTTCCG CGCTGCGTGA TGGCGACTAC TTCAAGGACG GCAAGCTGTT CGATGCCGAG GGTAACGAAG TGCCGATGCT GGAGCTGGAC GAGCATGGCA ATGAAACGGT CAGGCGCGCA GCGGTTGCCG AGCATTGA
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Protein sequence | MTTSPSTSPA KRPEDENLGL GANLAYGLQH VLTMYGGIVA VPLILGQAAG LNGAEIGMLI AASLFAGGLA TLLQTLGLPF FGCQLPLVQG VSFAGVATMG AILSSEGGGG LPGVLGAVMA ASLIGFLITP VFSRITKFFP PLVTGIVITT IGLTLMPVAA RWVMGGNSAS PEFGSVANIG LAGLTFAIVL LLSKLGSATI SRLSILLAMV IGTLIAWSLG MADFSKVTEG PMLAFPTPFH FGMPEFHIAA ILSMCIVIMV TLVETSADIL AVGEIIDTKV DSKRLGNGLR ADMASSILAP IFGSFTQSAF AQNVGLVAVT GVKSRYVVAT GGVILVVLGL LPIMGRVIAA VPTPVLGGAG IVLFGTVAAS GIRTLSKVSY KNNVNLIIVA ASLGFGMIPI AAPTFYHHFP NWFETIFHSG ISSAAIMAIL LNLIFNHFTT GNSENQSVFA AAYERTIQYS DISALRDGDY FKDGKLFDAE GNEVPMLELD EHGNETVRRA AVAEH
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