Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4602 |
Symbol | |
ID | 5872410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5142700 |
End bp | 5143506 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641549735 |
Product | hypothetical protein |
Protein accession | YP_001670824 |
Protein GI | 167035593 |
COG category | [S] Function unknown |
COG ID | [COG2912] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.795214 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCCAC GTCAAGCCTG CCTGGCCTGC CTGGAACGCG AGCCTGTCGC CCTGCTGGAA GCCGCATTGT GGATTGCCGC CGAGCACGAT CGTAGTGTCG AGCCCGCGGC CAGCCTTGCC ACCCTGAACG AGCTGCAGCG CGAGATAAGC GCCAACCTGC CGATGCTGCC AGTGTGCGAA CTGGCCCAGC CACTGCTGCG CCAACTGATT GCGCTGGGCT TTCAGCAGGA TGAATACCAC CCGTTACGCC CGCATGCGGC GATGATGGAC AAAGTACTGC AGCGCCGCCG CGGCCAACCG CTGACCCTGG CCATTCTTTC CCTGGAGCTG GCCCGGCGCT TGTCCATACC GCTGGAGGGC GTGGGCTTTC CTGGCCATTT CCTGCTGCGC GTGCCGGGTG CCGACCACCT GCTCGACCCC TGTGGCGGTC GGCGCTTGTA CCCGAGTGAC TGCCGCGAAC TGCTGGCACG CCAGTTTGGC CCACATGTGG CGCTGACGGC AGAGCACATG CGCAGCGCTA CGCCGCTGCA GATGCTGCAA CGCCTGTCGC GCAACCTGCG TCAACTGCAC ATCAGCAACG ATGACCACCT GGCCGCGCTG ATCGACGCCG AGCGGGTCAT GCAGTTGGGC CCGGTGCAAG TCAGCGATTA CGTGACCCGC GCTTCGCTCT ACCAACAACT GGATTGCCCG CAGGCCGAGC GCTTCGACCT GGAGCATGCG TTGCTGCTGA CGGAAGACCC GGTCCAGCGC CTGAAGCTGT CCGAGCGAAT CGGCAAGCTT CCGGCGGCGA ACCGTTCACT TCACTGA
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Protein sequence | MKPRQACLAC LEREPVALLE AALWIAAEHD RSVEPAASLA TLNELQREIS ANLPMLPVCE LAQPLLRQLI ALGFQQDEYH PLRPHAAMMD KVLQRRRGQP LTLAILSLEL ARRLSIPLEG VGFPGHFLLR VPGADHLLDP CGGRRLYPSD CRELLARQFG PHVALTAEHM RSATPLQMLQ RLSRNLRQLH ISNDDHLAAL IDAERVMQLG PVQVSDYVTR ASLYQQLDCP QAERFDLEHA LLLTEDPVQR LKLSERIGKL PAANRSLH
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