Gene PputGB1_4602 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4602 
Symbol 
ID5872410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5142700 
End bp5143506 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content65% 
IMG OID641549735 
Producthypothetical protein 
Protein accessionYP_001670824 
Protein GI167035593 
COG category[S] Function unknown 
COG ID[COG2912] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.795214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCAC GTCAAGCCTG CCTGGCCTGC CTGGAACGCG AGCCTGTCGC CCTGCTGGAA 
GCCGCATTGT GGATTGCCGC CGAGCACGAT CGTAGTGTCG AGCCCGCGGC CAGCCTTGCC
ACCCTGAACG AGCTGCAGCG CGAGATAAGC GCCAACCTGC CGATGCTGCC AGTGTGCGAA
CTGGCCCAGC CACTGCTGCG CCAACTGATT GCGCTGGGCT TTCAGCAGGA TGAATACCAC
CCGTTACGCC CGCATGCGGC GATGATGGAC AAAGTACTGC AGCGCCGCCG CGGCCAACCG
CTGACCCTGG CCATTCTTTC CCTGGAGCTG GCCCGGCGCT TGTCCATACC GCTGGAGGGC
GTGGGCTTTC CTGGCCATTT CCTGCTGCGC GTGCCGGGTG CCGACCACCT GCTCGACCCC
TGTGGCGGTC GGCGCTTGTA CCCGAGTGAC TGCCGCGAAC TGCTGGCACG CCAGTTTGGC
CCACATGTGG CGCTGACGGC AGAGCACATG CGCAGCGCTA CGCCGCTGCA GATGCTGCAA
CGCCTGTCGC GCAACCTGCG TCAACTGCAC ATCAGCAACG ATGACCACCT GGCCGCGCTG
ATCGACGCCG AGCGGGTCAT GCAGTTGGGC CCGGTGCAAG TCAGCGATTA CGTGACCCGC
GCTTCGCTCT ACCAACAACT GGATTGCCCG CAGGCCGAGC GCTTCGACCT GGAGCATGCG
TTGCTGCTGA CGGAAGACCC GGTCCAGCGC CTGAAGCTGT CCGAGCGAAT CGGCAAGCTT
CCGGCGGCGA ACCGTTCACT TCACTGA
 
Protein sequence
MKPRQACLAC LEREPVALLE AALWIAAEHD RSVEPAASLA TLNELQREIS ANLPMLPVCE 
LAQPLLRQLI ALGFQQDEYH PLRPHAAMMD KVLQRRRGQP LTLAILSLEL ARRLSIPLEG
VGFPGHFLLR VPGADHLLDP CGGRRLYPSD CRELLARQFG PHVALTAEHM RSATPLQMLQ
RLSRNLRQLH ISNDDHLAAL IDAERVMQLG PVQVSDYVTR ASLYQQLDCP QAERFDLEHA
LLLTEDPVQR LKLSERIGKL PAANRSLH