| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4588 |
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| Symbol | |
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| ID | 5872396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5129317 |
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| End bp | 5131707 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549721 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001670810 |
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| Protein GI | 167035579 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCT CCCCGCGTTG CGTCCCTCTC TGGCTAGGCC TTGCTACGCT GCCTGCCATC
GCTGTCGCCC CCCTGGCCTG CGCCGCCGAG CAACAGCAGG CCTACGCCTT CGCCCAGCCA
GCCCAGCCCT TGGCCCAGGC ACTCAACGCT TTCAGTCGTA CCACCGGCCA GAGCGTGGTC
TACACCCTTG AGCTACCAGG CGTGCAGGCG CCTGCGCTAA ATGGCCGGTA CAGCGCCGAA
CAGGCCCTGC AACAGCTGCT GGGTACTTCC GGGCTGGCCT GGCGCCGCGT CGATGCACGC
ACCTTCACCC TCGAAGCCGC CGACACCTCC GGTGCCCTCA ACCTGCAGGC CACAACGGTG
ACCTCGCAAC TGGATGACTA CAGCTATCAG CCCCCGGCTA GCGCCTCGAT CATGCGCGGG
CAGGGCCCTA ACCAGGACAT CCCCCAGGCG ATCAACGTGG TACCGGCGCA GGTCATCCGT
GATCAGGCGC CGCGTAACCT CGATGACGCC CTGGCCAATG TCAGCGGCAT TACCCAGGGC
AATAACTTCG GTGGCACGTC CGACACGGTG ATGAAGCGTG GTTTCGGCGA CAACCGCGAT
GGCTCGATCA TGCGCGATGG CATGCCCATC GTGCAGGGCC GCAGCCTCAA CGCCAGCACC
GAGCGGGTCG AAGTGCTCAA GGGCCCGGCT TCGCTGCTGT ACGGCATTCA GGACCCGGGT
GGGGTGATCA ACGTGGTCAG CAAGCGCCCG CAACTGCAGC AGTACAACGC CCTGACCGTG
CGTGGCTCGA CCTACGGCAG TGGTAAGAAC GGCAGTGGCG GCGGGCTCGA CAGCACTGGC
GCGCTGGGCG ACAGCAACTT CGCCTACCGC TTGGTCGTCG ACCACGAGGA CGAAGACTAC
TGGCGTAACT ACGGCGTGCA CCGCGAATCG CTGGTGGCGC CGTCGCTGGC CTGGCTGGGC
GAAGATACCC AGGTGGTGGT GGCTTACGAG CACCGCGAGT TTCTCTACCC GTTCGATCGG
GGTACCGCGT TCGGCAACAA CGGCCACCCA CTGAACATCC CCGCCACGCG TCGTCTGGAC
GAGCCCTTCA ACGACATGGA AGGGCGCTCC GACTTGTATC GCCTGGAAGT CGACCATCAG
TTGGCCGATG ACTGGAAGCT GCACTTCGGC TACAGCTTCA ACCGTGAAAC CTACGATGCC
AGCCAGGTGC GGGTGACGGC CGTCAACGAA GCAAAAGGCA CGCTGACACG CAGCATCGAC
GGCACCCACA ACGCCATGAG CCGTGACCAG TTCGCGACCG TCAGCCTGGC AGGCAACGTG
GAAGTGGCCG GCATGCAGCA CGACTTGCTG TTCGGCATCG ACCACGAAGA CCGCAAGATT
TTCCGGGGTG ATCTGATTCG CCAGACGGCC AAGTCCACGT TCAGCTATGT GGACCCAGTC
TACGGTCAGG AAGTGGAAGG CAGCACGGTG CGCGCCAGTG ACAGCGACCA GACCGACAAG
CTGCGCACCG ATGCGCTGTT CGTGCAGGAC GCCTTGCACC TGGACGAGCA CTGGATCCTG
GTGGCCGGCG CGCGCTTCCA GCAGTACGAC CAGTACGCCG GTCGCGGCCG CCCGTTCCAC
GTCAATACCG ACATCAGTGG CCAGGCCTGG GTGCCTCACG CCGGCATTGT CTACAAGGTC
GATGACCAGC TGTCGTTCTA TGGCAGCTAC AGCGAATCGT TCAAGCCAAA CTCCACCATT
GCGCCACTGA CCGGCAATAT CGTGCTCGAC TCGTCGGTAG CCCCGGAAGA GGGCAAGTCG
TGGGAGCTGG GGGCCAAGCT CGATATGCCG GGCCGCATCA CGGGCACCCT GGCGCTGTTC
GATATCACCA AACGCAACGT CCTGGTTTCG AACTTCGACG CCAGCACTAG CGAGACGGTC
TACAGCAACG CGGGTGAAGT CAATTCACGA GGCGTGGAAC TTGACCTGAC CGGCCAGCTG
ACTGATCGCT GGAGCTTGAT TGGCAGCTAT GCCTACACGG ATGCCAAGGT TACCAAGGAC
CCGGACCTGC AAGGCAACCG CCTGCAGAAC GTAGCCAAGC ACAGTGGTTC GTTGTCGGCT
GTGTACGACT TCGGCAGCCT GTTCGGTGGC GACAAGCTGA GGGTAGGTGC GGGTGCGCGC
TACGTGGGCG AGCGGTCGGG TAACTCGACC AACACCTTCG ACCTGCCGTC CTACACCGTG
GCGGATGCAT TCGCCAGCTA CGAGACCAAG CTCGATGAAC ACAACGTGCG CCTGCAGCTC
AACGTGAAGA ACCTGTTCGA CAAGGTTTAC TACAGCTCGG CGGTGAACCA GTACTTTGTG
GCGATTGGAG ATGCGCGGCA GGTGAGTTTG TCGAGTACCT TTGAGTTTTA A
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| Protein sequence | MKFSPRCVPL WLGLATLPAI AVAPLACAAE QQQAYAFAQP AQPLAQALNA FSRTTGQSVV
YTLELPGVQA PALNGRYSAE QALQQLLGTS GLAWRRVDAR TFTLEAADTS GALNLQATTV
TSQLDDYSYQ PPASASIMRG QGPNQDIPQA INVVPAQVIR DQAPRNLDDA LANVSGITQG
NNFGGTSDTV MKRGFGDNRD GSIMRDGMPI VQGRSLNAST ERVEVLKGPA SLLYGIQDPG
GVINVVSKRP QLQQYNALTV RGSTYGSGKN GSGGGLDSTG ALGDSNFAYR LVVDHEDEDY
WRNYGVHRES LVAPSLAWLG EDTQVVVAYE HREFLYPFDR GTAFGNNGHP LNIPATRRLD
EPFNDMEGRS DLYRLEVDHQ LADDWKLHFG YSFNRETYDA SQVRVTAVNE AKGTLTRSID
GTHNAMSRDQ FATVSLAGNV EVAGMQHDLL FGIDHEDRKI FRGDLIRQTA KSTFSYVDPV
YGQEVEGSTV RASDSDQTDK LRTDALFVQD ALHLDEHWIL VAGARFQQYD QYAGRGRPFH
VNTDISGQAW VPHAGIVYKV DDQLSFYGSY SESFKPNSTI APLTGNIVLD SSVAPEEGKS
WELGAKLDMP GRITGTLALF DITKRNVLVS NFDASTSETV YSNAGEVNSR GVELDLTGQL
TDRWSLIGSY AYTDAKVTKD PDLQGNRLQN VAKHSGSLSA VYDFGSLFGG DKLRVGAGAR
YVGERSGNST NTFDLPSYTV ADAFASYETK LDEHNVRLQL NVKNLFDKVY YSSAVNQYFV
AIGDARQVSL SSTFEF
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