| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4569 |
|---|
| Symbol | |
|---|
| ID | 5872377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida GB-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010322 |
|---|
| Strand | + |
|---|
| Start bp | 5108000 |
|---|
| End bp | 5109457 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641549702 |
|---|
| Product | membrane bound O-acyl transferase MBOAT family protein |
|---|
| Protein accession | YP_001670791 |
|---|
| Protein GI | 167035560 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1696] Predicted membrane protein involved in D-alanine export |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.92018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTTCT CGTCCAACGT GTTCCTGTTC CTGTTCTTGC CGATCTTCCT CGGCCTGTAC
TACCTGAGCG GGCAACGTTA TCGCAACCTG CTGCTGCTGA TCGCCAGCTA CATCTTCTAT
GCCTGGTGGC GGGTGGACTT CCTGGCCCTG TTCGCCGGGG TCACCCTGTG GAATTACTGG
ATCGGCCTCA AAGTGGGTGC CGCCGGTGTG CGCACCAAGC CCGCCCAGCG CTGGCTGCTG
CTTGGCGTGG GTGTCGACCT GGCGATTCTC GGCTACTTCA AGTACGCCAA CTTCGGCGTC
GACAGCCTCA ACGCGATCAT GGCCTCGTTC GGCCTTGAGC CGTTCATCCT CACCCACGTG
CTGCTGCCGA TCGGTATCTC GTTCTACATC TTCGAGTCGA TCAGTTACAT CATCGACGTC
TACCGTGGCG ACACCCCGGC TACTCGCAAC CTGATCGACT TCGCCGCGTT CGTGGCCATC
TTCCCGCACC TGATCGCAGG CCCCGTGCTG CGCTTCAAGG ACCTGGTCGA GCAATTCAAC
AACCGCACCC ACACCCTGGA CAAGTTTTCC GAAGGCTGCA CCCGCTTCAT GCAGGGCTTC
ATCAAGAAAG TGTTCATCGC CGACACCCTG GCCGTGGTCG CCGACCACTG CTTCGCCCTG
CAAAACCCGA CCACGGGCGA TGCCTGGCTG GGCGCGCTGG CGTACACCGC ACAGCTGTAC
TTCGACTTCA GCGGCTACAG CGACATGGCC ATCGGCCTGG GCCTGATGAT GGGCTTCCGC
TTCATGGAGA ACTTCAAGCA GCCATACATC AGCCAATCGA TCACCGAGTT CTGGCGGCGC
TGGCACATCA GCCTGTCGAC CTGGCTGCGC GACTACCTGT ACATCACCCT GGGCGGTAAC
CGCAAAGGCA CCTTCAACAC CTACCGCAAC CTGTTCCTGA CCATGCTGCT GGGCGGCCTG
TGGCACGGTG CCAACTTCAC TTACATCATC TGGGGCGCCT GGCACGGCAT GTGGCTGGCC
ATCGAACGCG CGCTGGGCAT CGACACCAAC CCGCAGCGCT TCAACCCGGT CAAATGGGCC
TTCACCTTCC TGCTGGTGGT AGTCGGCTGG GTGATCTTCC GCGCCGAGAA CCTGCACGTG
GCCGGCCGCA TGTACGGCGC CATGTTCAGC TTCGGCGACT GGCAGCTTTC GGAACTCAAC
AGTGCCCAGC TGACCGGCCT GCAGGTGGCG ACCCTGGTCA TCGCCTACCT CACCCTGGCG
TTCTTCGGCC TACGCGACTT CTACCGCAAT GCCAAACCGA CGCCCAAGGC AACCCCGGTG
CAGGTGAACA GCGATGGCTC GATCGGCCTG GACTGGACCC GGGTGATGAC CCGCGCCCTG
ATTCTGCTGC TGTTCGTCGC CTCGATCCTC AAGCTTTCGG CGCAGAGCTA CTCGCCGTTC
CTGTACTTCC AGTTCTGA
|
|---|
| Protein sequence | MVFSSNVFLF LFLPIFLGLY YLSGQRYRNL LLLIASYIFY AWWRVDFLAL FAGVTLWNYW
IGLKVGAAGV RTKPAQRWLL LGVGVDLAIL GYFKYANFGV DSLNAIMASF GLEPFILTHV
LLPIGISFYI FESISYIIDV YRGDTPATRN LIDFAAFVAI FPHLIAGPVL RFKDLVEQFN
NRTHTLDKFS EGCTRFMQGF IKKVFIADTL AVVADHCFAL QNPTTGDAWL GALAYTAQLY
FDFSGYSDMA IGLGLMMGFR FMENFKQPYI SQSITEFWRR WHISLSTWLR DYLYITLGGN
RKGTFNTYRN LFLTMLLGGL WHGANFTYII WGAWHGMWLA IERALGIDTN PQRFNPVKWA
FTFLLVVVGW VIFRAENLHV AGRMYGAMFS FGDWQLSELN SAQLTGLQVA TLVIAYLTLA
FFGLRDFYRN AKPTPKATPV QVNSDGSIGL DWTRVMTRAL ILLLFVASIL KLSAQSYSPF
LYFQF
|
|---|
| |