Gene PputGB1_4526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4526 
Symbol 
ID5872334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp5064107 
End bp5064685 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content61% 
IMG OID641549659 
Producttransport-associated 
Protein accessionYP_001670748 
Protein GI167035517 
COG category[R] General function prediction only 
COG ID[COG2823] Predicted periplasmic or secreted lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCTA TGCGCCTCGG CCTGATGGCC CTGACCCTGT GCCTGAGCGT CACCGGTTGC 
AGCTCGGTAC TCACCTCTAC CCGCAATTCG CCGATCGAGG ACGATCGCGG TACGCGCACC
ATTGGCAGCA AGATCGACGA CTCGCTGATC GAGACCAAGG CCGCCGTGAA CATCTCCAAG
GCCAACCCAG ACCTGGACAA GGGCTCGCAC ATCGTTGTCA GCAGCTACAA CGGCATTGTC
CTGCTGGCCG GCCAGACCCC ACGCGCCGAC CTCAAGAGCC TGGCCGAGCA AACCGCCAGC
CAGGTACAAC GGGTCAAGAA AGTGCACAAC GAGCTGCAGG TGATGCAGCC CTCCTCCATC
CTGGCGCGCA ACAACGACGC CTGGCTGACC ACCAAGATCA AGACCCAGAT GCTGACCGAC
AATGCGGTGC CAAGCTCGCG CATCAAGGTG ATCACCGAAA ACGGCATCGT CTACCTGCTT
GGCCTGGTCA CCCAGCAAGA GGCCAACTCG GCCACTGCCG TGGTGCAAGG CGTGTCGGGC
GTGCAAAAGA TCGTCAAGCT GTTCGAGTAC ATCGACTGA
 
Protein sequence
MTPMRLGLMA LTLCLSVTGC SSVLTSTRNS PIEDDRGTRT IGSKIDDSLI ETKAAVNISK 
ANPDLDKGSH IVVSSYNGIV LLAGQTPRAD LKSLAEQTAS QVQRVKKVHN ELQVMQPSSI
LARNNDAWLT TKIKTQMLTD NAVPSSRIKV ITENGIVYLL GLVTQQEANS ATAVVQGVSG
VQKIVKLFEY ID