Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4526 |
Symbol | |
ID | 5872334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | + |
Start bp | 5064107 |
End bp | 5064685 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641549659 |
Product | transport-associated |
Protein accession | YP_001670748 |
Protein GI | 167035517 |
COG category | [R] General function prediction only |
COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCTA TGCGCCTCGG CCTGATGGCC CTGACCCTGT GCCTGAGCGT CACCGGTTGC AGCTCGGTAC TCACCTCTAC CCGCAATTCG CCGATCGAGG ACGATCGCGG TACGCGCACC ATTGGCAGCA AGATCGACGA CTCGCTGATC GAGACCAAGG CCGCCGTGAA CATCTCCAAG GCCAACCCAG ACCTGGACAA GGGCTCGCAC ATCGTTGTCA GCAGCTACAA CGGCATTGTC CTGCTGGCCG GCCAGACCCC ACGCGCCGAC CTCAAGAGCC TGGCCGAGCA AACCGCCAGC CAGGTACAAC GGGTCAAGAA AGTGCACAAC GAGCTGCAGG TGATGCAGCC CTCCTCCATC CTGGCGCGCA ACAACGACGC CTGGCTGACC ACCAAGATCA AGACCCAGAT GCTGACCGAC AATGCGGTGC CAAGCTCGCG CATCAAGGTG ATCACCGAAA ACGGCATCGT CTACCTGCTT GGCCTGGTCA CCCAGCAAGA GGCCAACTCG GCCACTGCCG TGGTGCAAGG CGTGTCGGGC GTGCAAAAGA TCGTCAAGCT GTTCGAGTAC ATCGACTGA
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Protein sequence | MTPMRLGLMA LTLCLSVTGC SSVLTSTRNS PIEDDRGTRT IGSKIDDSLI ETKAAVNISK ANPDLDKGSH IVVSSYNGIV LLAGQTPRAD LKSLAEQTAS QVQRVKKVHN ELQVMQPSSI LARNNDAWLT TKIKTQMLTD NAVPSSRIKV ITENGIVYLL GLVTQQEANS ATAVVQGVSG VQKIVKLFEY ID
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