| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4517 |
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| Symbol | murE |
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| ID | 5872324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5054506 |
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| End bp | 5055996 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549650 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_001670739 |
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| Protein GI | 167035508 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACAA TGCCATTAAG CAAACTTTTC GCCCACGCCA GCCGTGACCC GCTGATTCGT
GAACTGACCC TGGACAGCCG CAACGTGCGC CCGGGTGACC TGTTCCTGGC CGTGCCGGGT
GCCAAGGTCG ATGGCCGCGA GCATATCGCC GATGCCTTGA CCCGTGGTGC CGCCGCCGTG
GCCTATGAAG AGCAGGGCGC CACCGTGCTG CCGCTGACCG AAGTGCCATT GATTCCGGTC
AAGGGCCTGA TCGCACAGCT GTCGGATGTC GCCGGGCGTT TTTATGGCGA ACCCAGCCGC
CAGCTGAACC TGGTCGGTGT GACCGGGACC AACGGCAAGA CCAGCGTTAC CCAATTGGTG
GCCCAGGCGC TCGACCTGCT CGGCCAGCGC TGCGGCTTGA TCGGCACCCT GGGTACCGGC
TTCTACGGGG AGCTGCAGAG CGGCCGTCTG ACCACGCCCG ACCCGATTGC CGTGCAGTCG
ACCCTTTACG ATTTGAAAAA GCAGGGCGCC AAGGCTGTGG CCATGGAGGT TTCCTCTCAC
GCCCTGGAGC AAGGCCGAGT CGCCGCATTG GAGTTCGACA TCGCGGTGAT GACCAACCTG
TCCCGCGACC ACCTCGACTA CCACGGCAGC ATGGAGGCCT ATGAGGCCGC CAAGGCCAAG
CTGTTCGCCT GGCCCAGCCT GCGTTGCCAG GTGGTCAACC TGGATGACGC CTTTGGCCGT
CGCCTGGCCG CTGACTTTGC CCGCCGTCCG AGCGTCGACC ATATCGACAC CCGGCTGCTG
AGCTACAGCC TGGAAAACCC AGATGCCTCG CTGTTCTGTC GCGAGGCCGC GTTCAGTGAC
GATGGCGTGC GCGCGACGAT CGTTACCGCA CAAGGTGAGC GTATCCTGCG CAGTCAGCTG
CTGGGGCGCT TCAACCTGAG CAACATGCTC GCCGCTGTCG CGACACTGCT GGCACTGGAT
TATGCACTGG ACGAAATCCT CAAGGTCACC CCGCAACTGC ACGGTCCGGT AGGCCGTATG
CAGCGCCTGG GTGGCGGCGA CAAACCGCTG GTGGTGGTCG ATTACGCCCA CACCCCGGAC
GCCCTTGAAA AAGTGCTCGA AGCGCTGCGC CCACACGCCC ACGGTAAGTT GCTGTGCCTG
TTCGGCTGCG GCGGCGACCG TGATCGCGGC AAGCGCCCGC TGATGGCCGA AGTGGCCGAG
CGCCTGGCCG ATCGCGTACT GGTCACCGAT GACAACCCAC GTACCGAAGA CCCACAGCGC
ATCTTCGACG ACATCCGTCC CGGTTTCGCC CGGCCTGTCT CGGTCGAGTT CGTTGCCGGT
CGTGGCGAGG CCATCGCGCA GTTGATTGCC TCCGCTGCTG CCAACGACGT GATCGTGCTG
GCTGGCAAGG GGCACGAGGA TTACCAGGAG ATCAATGGCG AGCGCCATGA CTTCTCCGAT
TTGACCGAAG CCGAAAAGGC ACTTGCAGCC TGGGAGGCGC CACATGCTTA A
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| Protein sequence | MMTMPLSKLF AHASRDPLIR ELTLDSRNVR PGDLFLAVPG AKVDGREHIA DALTRGAAAV
AYEEQGATVL PLTEVPLIPV KGLIAQLSDV AGRFYGEPSR QLNLVGVTGT NGKTSVTQLV
AQALDLLGQR CGLIGTLGTG FYGELQSGRL TTPDPIAVQS TLYDLKKQGA KAVAMEVSSH
ALEQGRVAAL EFDIAVMTNL SRDHLDYHGS MEAYEAAKAK LFAWPSLRCQ VVNLDDAFGR
RLAADFARRP SVDHIDTRLL SYSLENPDAS LFCREAAFSD DGVRATIVTA QGERILRSQL
LGRFNLSNML AAVATLLALD YALDEILKVT PQLHGPVGRM QRLGGGDKPL VVVDYAHTPD
ALEKVLEALR PHAHGKLLCL FGCGGDRDRG KRPLMAEVAE RLADRVLVTD DNPRTEDPQR
IFDDIRPGFA RPVSVEFVAG RGEAIAQLIA SAAANDVIVL AGKGHEDYQE INGERHDFSD
LTEAEKALAA WEAPHA
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