| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4510 |
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| Symbol | ddl |
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| ID | 5872317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5046037 |
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| End bp | 5046993 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549643 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001670732 |
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| Protein GI | 167035501 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 0.926971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG CCTACGACAA GCTGCACTCC ACCTTGGACG TCAAGGCATT CGGCCGCGTT
GCCGTGCTGT ACGGTGGCAA GAGCGCCGAG CGTGAGGTGT CGTTGAAGTC TGGCGCTGCG
GTGATCGATG CGCTGACAAC TGCCGGTGTC GACGTGGTTG CCATCGACGT CGGTGACGAC
CTGCTCGCGC GCCTGCAAAG CGAGGAAATC GACCGCGCCT TCATCATCCT CCACGGCCGT
GGCGGTGAAG ACGGCAGCAT GCAAGGCCTG CTGGAGTGCC TTGGCATCCC CTACACCGGC
AGCGGCATCC TTGCTTCGGC GCTGGCCATG GACAAGCTGC GCACCAAGCA GGTGTGGCAG
AGCCTGGGCA TTCCGACCCC GCGTCACGCG GTATTGGCGA GCGAAAGCGA TTGTTTGCAG
GCCAGTACGG AACTGGGCTT CCCGCTTATC GTCAAACCCG CCCATGAAGG CTCTAGCATC
GGCATGGCCA AGGTGAACAG CGCCCAGGAA CTGGTCGCCG CCTGGCAGGA CGCCGCCAAA
TACGATTCCC AGGTACTGGT GGAACAGTGG ATCCACGGCC CGGAGTTCAC CATCGCGGTA
CTGCGCGGCC AGGTGCTGCC GCCGATCGCC CTGGGTACGC CGCACGTGTT CTACGACTAC
GACGCCAAGT ACATCGCCAA CGATACCCAG TACCGCATCC CGTGCGGCCT GGATAGCGCC
AAGGAACAGG AACTGATCGA CCTGACCGCA CGTGCCTGCG ATGCCATCGG CATCGAAGGC
TGGGGGCGGC TGGACGTGAT GCAGGACGAG CAGGGCCGGT TCTGGCTGCT CGAAGTCAAC
ACCGCACCAG GCATGACAGA TCATAGCCTG GTGCCCATGG CGGCCCGCGC GGCCGGCTTG
GACTTCCAGC AACTGGTGCT GGCAATCCTG GCCGAAAGCG TGGCGACGCG AGGTTAA
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| Protein sequence | MTSAYDKLHS TLDVKAFGRV AVLYGGKSAE REVSLKSGAA VIDALTTAGV DVVAIDVGDD
LLARLQSEEI DRAFIILHGR GGEDGSMQGL LECLGIPYTG SGILASALAM DKLRTKQVWQ
SLGIPTPRHA VLASESDCLQ ASTELGFPLI VKPAHEGSSI GMAKVNSAQE LVAAWQDAAK
YDSQVLVEQW IHGPEFTIAV LRGQVLPPIA LGTPHVFYDY DAKYIANDTQ YRIPCGLDSA
KEQELIDLTA RACDAIGIEG WGRLDVMQDE QGRFWLLEVN TAPGMTDHSL VPMAARAAGL
DFQQLVLAIL AESVATRG
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