| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4488 |
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| Symbol | groEL |
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| ID | 5872295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 5021555 |
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| End bp | 5023198 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641549621 |
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| Product | chaperonin GroEL |
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| Protein accession | YP_001670710 |
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| Protein GI | 167035479 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0459] Chaperonin GroEL (HSP60 family) |
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| TIGRFAM ID | [TIGR02348] chaperonin GroL |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0309413 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGCTA AAGACGTAAA ATTCGGCGAT TCCGCTCGTA AGAAAATGCT GGTTGGTGTC
AACGTTCTGG CTGACGCGGT AAAAGCGACC CTGGGCCCGA AAGGCCGTAA CGTGGTACTG
GCCAAGAGCT TCGGCGCGCC AACCATCACC AAGGACGGCG TTTCCGTCGC CAAAGAAATC
GAGCTGAAAG ACGCGTTCGA AAACATGGGC GCCCAGCTGG TCAAGGAAGT GGCTTCCAAG
GCCAACGACG CTGCCGGTGA CGGCACCACC ACCGCTACCG TTCTGGCTCA GGCCATCGTC
AACGAAGGCC TGAAAGCCGT CGCTGCCGGC ATGAACCCGA TGGACCTCAA GCGCGGTATC
GACAAGGCTA CCGCTGCAGT CGTTGCCGAG CTGAAGAACC TGTCCAAGCC ATGCGCCGAC
TCCAAGGCCA TCGCCCAGGT AGGCACCATC TCCGCCAACT CTGACGACTC CATCGGCAAC
ATCATTGCCG AAGCCATGGA AAAAGTCGGT AAAGAAGGCG TGATCACCGT TGAAGAAGGC
TCGGGCCTGG AAAACGAACT GTCCGTCGTA GAAGGCATGC AGTTCGACCG TGGCTACCTG
TCGCCATACT TCGTCAACAA GCCAGACACC ATGGTTGCCG AGCTGGAAGG CCCGCTGCTG
CTGCTGGTCG ACAAGAAAAT CTCCAACATC CGTGAGCTGC TGCCAGTTCT GGAAGCCGTT
GCCAAGGCCG GCCGCCCACT GCTGATCGTT GCCGAAGATG TCGAAGGCGA AGCGCTGGCT
ACCCTGGTAG TCAACAACAT GCGCGGCATC GTCAAGGTTG CAGCGGTCAA GGCGCCAGGC
TTCGGCGACC GCCGCAAGGC CATGCTGCAG GACATCGCCG TCCTGACTGG CGGCCAGGTC
ATCTCCGAAG AAATCGGTCT GTCCCTGGAA ACCGCTACCC TGGAGCACCT GGGTAACGCC
AAGCGCGTCA TCCTGTCCAA GGAAAACACC ACCATCATCG ACGGCGCTGG CGCCGACACC
GAGATCGAAG CACGCGTCAA GCAGATCCGC GCCCAGATCG AAGAAACTTC TTCGGACTAC
GACCGTGAGA AGCTGCAAGA GCGTCTGGCC AAGCTGGCTG GCGGTGTTGC CGTGATCAAG
GTCGGTGCCG GCACCGAAGT TGAAATGAAA GAGAAGAAAG CCCGCGTTGA AGACGCCCTG
CACGCTACCC GTGCAGCCGT TGAAGAAGGC GTGGTGCCTG GCGGTGGTGT TGCCCTGGTT
CGTGCCCTGG CCGCGATCGT TGACCTGAAA GGCGAAAACG AAGACCAGAA CGTCGGTATC
GCCCTGCTGC GCCGTGCTGT TGAAGCCCCG CTGCGCCAGA TCACTGCCAA CGCCGGCGAC
GAGCCAAGCG TTGTCGCTGA CAAGGTCAAG CAAGGTTCGG GTAACTTCGG TTACAACGCT
GCTACCGGTG AATACGGCGA CATGATCGAG ATGGGTATCC TGGACCCAGC CAAGGTCACC
CGTTCGGCCC TGCAAGCTGC TGCTTCGATT GGCGGTCTGA TGATCACCAC CGAAGCCATG
ATTGCTGACG CTCCGAGCGA AGCCCCAGCT GGCGGCGGCA TGCCAGACAT GGGCGGCATG
GGTGGCATGG GCGGCATGAT GTAA
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| Protein sequence | MAAKDVKFGD SARKKMLVGV NVLADAVKAT LGPKGRNVVL AKSFGAPTIT KDGVSVAKEI
ELKDAFENMG AQLVKEVASK ANDAAGDGTT TATVLAQAIV NEGLKAVAAG MNPMDLKRGI
DKATAAVVAE LKNLSKPCAD SKAIAQVGTI SANSDDSIGN IIAEAMEKVG KEGVITVEEG
SGLENELSVV EGMQFDRGYL SPYFVNKPDT MVAELEGPLL LLVDKKISNI RELLPVLEAV
AKAGRPLLIV AEDVEGEALA TLVVNNMRGI VKVAAVKAPG FGDRRKAMLQ DIAVLTGGQV
ISEEIGLSLE TATLEHLGNA KRVILSKENT TIIDGAGADT EIEARVKQIR AQIEETSSDY
DREKLQERLA KLAGGVAVIK VGAGTEVEMK EKKARVEDAL HATRAAVEEG VVPGGGVALV
RALAAIVDLK GENEDQNVGI ALLRRAVEAP LRQITANAGD EPSVVADKVK QGSGNFGYNA
ATGEYGDMIE MGILDPAKVT RSALQAAASI GGLMITTEAM IADAPSEAPA GGGMPDMGGM
GGMGGMM
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