| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4449 |
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| Symbol | sbcB |
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| ID | 5872257 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4982589 |
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| End bp | 4984022 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641549584 |
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| Product | exonuclease I |
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| Protein accession | YP_001670673 |
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| Protein GI | 167035442 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2925] Exonuclease I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000000484535 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000188223 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCTCCA GCATTTTCTG GCACGACTAC GAAACCACCG GCATCAACCC GCGCTGCGAT
CGGCCGCTGC AGGTGGCTGG TGTGCGCACT GACTTCGACC TCAACGAAAT CGACGAGCCG
ATCAGCCTTT ATTGCCGGCC CTCGGACGAT ATCCTGCCGC ACCCGGCGGC CTGCCTGGTA
ACCGGCATCA CCCCGCAGTT GCTGGCTGAG CAGGGCCTGT GCGAAGCCGA GTTCATGACC
CAGGTGTACG CACAACTGGC GCAGCCGGGT ACCTGTGGCG CGGGCTACAA CACGCTGCGC
TTCGACGATG AAGTGACCCG CTACAGTTTG TACCGCAATT TTTTCGACCC CTATGCCCGT
GAGTGGCAGG GCGGTAACAG CCGCTGGGAC CTGATCGACA TCGTGCGCAC CGCCTATGCC
CTGCGCCCGG ATGGCATCCA ATGGCCGCAG CAGGACGGGC GCACCAGCCT GCGCCTGGAA
CTGCTGAGCA AGGCCAATGG CATTGACCAC GGGCATGCCC ACGAAGCGCT TTCCGACGTG
CGGGCAACCA TTGCCCTGGC CCGCCTGATT CGGCAGAAAC AGCCCAAGTT GTATGACTGG
CTGTTCCAGT TGCGCAGCAA GCATAAAGTG ATGGAGCAAA TTCGTTTGTT GCAGCCTCTG
GTGCATATAT CCGGGCGTTT TTCTGCGGCG CGTAATTACC TGGGTGTCGT ATTGCCACTG
GCCTGGCACC CGCGTAATCG CAATGCGCTG ATTGTCTGCG ACCTGCACCA TGAAACCCTA
CCGTTACTAC GGGAAAGTGC TGAAATTCTG CGTCAGCGCT TGTACACCCG TCATGATGAA
TTGGCCGAAG GTGAATTACC GGTACCGCTC AAATTGGTGC AGATCAATCG CTGCCCGGTA
CTGGCGCCGC TGTCGGTATT GCGCCCGGCC GATCAACAAC GGTTGGGTCT GGACTTGACG
TTGTTACAAT CGCGCGGTGA ACAGTTGGCC AATCAACAGG CGCAATGGCA AGACAAGCTG
GAACACATCT ATGGCAAGGA TGAGTTCGCC CCGAGTGAAG ACCCGGAACA GCAGTTGTAT
GAGGGATTTA TCGGTGACCG CGACCGGCGT TTATGCGAGC AAGTTCGTGC GCTGGAACCG
GCGCAGTTGA GCCGTGGCCA CTGGATGTTC GATGACCCGC GTTTGCCGGA GCTGTTGTTC
CGTTATCGGG CTCGTAACTT CCCTGAAACC TTGACCAGCG AAGAGCTGCA ACGGTGGTAC
GGCTTCTGCC AGCAACGCCT GAGCGACCCG CAGTGGGGCG CACCCAATAC CCTGGGCGAC
TTTGAACAGG CGCGCCAGCA AGCCTGGCAG GGGGCCGACG AGGCGGGCCG GCGAGTGCTC
GAGGCCTGGC AAGTGCATGC CCGTCAATTG CAGGCACAAT TTGCAATTGG CTGA
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| Protein sequence | MSSSIFWHDY ETTGINPRCD RPLQVAGVRT DFDLNEIDEP ISLYCRPSDD ILPHPAACLV
TGITPQLLAE QGLCEAEFMT QVYAQLAQPG TCGAGYNTLR FDDEVTRYSL YRNFFDPYAR
EWQGGNSRWD LIDIVRTAYA LRPDGIQWPQ QDGRTSLRLE LLSKANGIDH GHAHEALSDV
RATIALARLI RQKQPKLYDW LFQLRSKHKV MEQIRLLQPL VHISGRFSAA RNYLGVVLPL
AWHPRNRNAL IVCDLHHETL PLLRESAEIL RQRLYTRHDE LAEGELPVPL KLVQINRCPV
LAPLSVLRPA DQQRLGLDLT LLQSRGEQLA NQQAQWQDKL EHIYGKDEFA PSEDPEQQLY
EGFIGDRDRR LCEQVRALEP AQLSRGHWMF DDPRLPELLF RYRARNFPET LTSEELQRWY
GFCQQRLSDP QWGAPNTLGD FEQARQQAWQ GADEAGRRVL EAWQVHARQL QAQFAIG
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