Gene PputGB1_4435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4435 
Symbol 
ID5872243 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4964786 
End bp4966138 
Gene Length1353 bp 
Protein Length450 aa 
Translation table11 
GC content67% 
IMG OID641549570 
Product3-carboxy-cis,cis-muconate cycloisomerase 
Protein accessionYP_001670659 
Protein GI167035428 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.115184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0129696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC AACTGTTCGA CGCCTACTTC ACCGCGCCGG CCATGCGCGA GGTTTTTTCC 
GACCGTGGCC GGCTGCAGGG CATGCTCGAT TTCGAAGCCG CGCTGGCCCA TGCCGAGGCC
GCTGCCGGGC TGGTCCCGCA CAGCGCTGTG GCGGCCATCG AGGCGGCGTG CCAGGCCGAG
CGCTATGACG TTGGCGCGCT GGCCAATGCC ATCGCCACCG CTGGTAACTC GGCGATCCCG
CTGGTGAAGG CGTTGGGCAA GGTGATTGCC ACGGGCGTGC CTGAAGCCGA GCGCTATGTG
CACCTGGGGG CTACCAGCCA GGACGCGATG GACACCGGTC TTGTGTTGCA GTTGCGCGAT
GCCCTCGATT TGATCGAAGC CGACCTTGGC AAACTGGCCG ACACCCTGTC GCAGCAGGCC
TTGAAGCATG CCGATACGCC ATTGGTGGGC CGCACCTGGC TGCAGCACGC CACCCCTGTG
ACCCTGGGCA TGAAACTGGC CGGTGTGTTG GGCGCCTTGA CCCGCCACCG TCAGCGCCTG
CGGGAACTTC GTCCGCGCCT GCTGGTGCTG CAGTTCGGCG GTGCCTCGGG CAGCCTGGCG
GCACTGGGCA GCAAGGCGAT GCCGGTGGCT GAAGCGCTGG CCGAGCAACT CAAGCTGACC
CTGCCCGAGC AACCCTGGCA CACCCAGCGC GACCGCCTGG TGGAATTTGC CTCGGTACTG
GGCCTGGTTG CCGGCAGCCT GGGCAAGTTC GGCCGCGATA TCAGCCTGCT GATGCAAACC
GAGGCGGAGG AGGTGTTCGA ACCTTCCGCA CCAGGCAAGG GCGGTTCTTC GACCATGCCG
CACAAGCGCA ACCCGGTCGG TGCCGCGGTG TTGATCGGTG CTGCCACTCG CGTGCCGGGC
CTGCTGTCGA CGCTGTTCGC CGCCATGCCC CAGGAGCACG AGCGCAGCCT CGGCCTGTGG
CACGCCGAAT GGGAAACCCT GCCGGATATC TGCTGCCTGG TCTCTGGCGC CCTGCGCCAG
GCCCAGGTGA TTGCCGAGGG CATGGAGGTG GATGCCGTGC GCATGCGCCA CAACCTCGAT
CTGACCCAAG GCCTGGTGCT GGCCGAAGCG GTGAGCATCG TCCTCGCCCA ACGCCTGGGC
CGTGACCGTG CTCACCACCT GTTGGAACAA TGCTGCCAGC GCGCGGTGGC TGAACAGCGC
CACCTGCGTG CTGTGCTGGG TGACGAGCCG CAGGTCAGCG CCGAGCTGTC TGGCGAAGAA
CTCGATCGCC TGCTCGACCC TGCCCATTAC CTGGGCCAGG CCCGCGTCTG GGTGGCGCGC
GCCGTATCCG AACATCAACA TTTCACTGCC TGA
 
Protein sequence
MSNQLFDAYF TAPAMREVFS DRGRLQGMLD FEAALAHAEA AAGLVPHSAV AAIEAACQAE 
RYDVGALANA IATAGNSAIP LVKALGKVIA TGVPEAERYV HLGATSQDAM DTGLVLQLRD
ALDLIEADLG KLADTLSQQA LKHADTPLVG RTWLQHATPV TLGMKLAGVL GALTRHRQRL
RELRPRLLVL QFGGASGSLA ALGSKAMPVA EALAEQLKLT LPEQPWHTQR DRLVEFASVL
GLVAGSLGKF GRDISLLMQT EAEEVFEPSA PGKGGSSTMP HKRNPVGAAV LIGAATRVPG
LLSTLFAAMP QEHERSLGLW HAEWETLPDI CCLVSGALRQ AQVIAEGMEV DAVRMRHNLD
LTQGLVLAEA VSIVLAQRLG RDRAHHLLEQ CCQRAVAEQR HLRAVLGDEP QVSAELSGEE
LDRLLDPAHY LGQARVWVAR AVSEHQHFTA