Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4435 |
Symbol | |
ID | 5872243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4964786 |
End bp | 4966138 |
Gene Length | 1353 bp |
Protein Length | 450 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641549570 |
Product | 3-carboxy-cis,cis-muconate cycloisomerase |
Protein accession | YP_001670659 |
Protein GI | 167035428 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.115184 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0129696 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAACC AACTGTTCGA CGCCTACTTC ACCGCGCCGG CCATGCGCGA GGTTTTTTCC GACCGTGGCC GGCTGCAGGG CATGCTCGAT TTCGAAGCCG CGCTGGCCCA TGCCGAGGCC GCTGCCGGGC TGGTCCCGCA CAGCGCTGTG GCGGCCATCG AGGCGGCGTG CCAGGCCGAG CGCTATGACG TTGGCGCGCT GGCCAATGCC ATCGCCACCG CTGGTAACTC GGCGATCCCG CTGGTGAAGG CGTTGGGCAA GGTGATTGCC ACGGGCGTGC CTGAAGCCGA GCGCTATGTG CACCTGGGGG CTACCAGCCA GGACGCGATG GACACCGGTC TTGTGTTGCA GTTGCGCGAT GCCCTCGATT TGATCGAAGC CGACCTTGGC AAACTGGCCG ACACCCTGTC GCAGCAGGCC TTGAAGCATG CCGATACGCC ATTGGTGGGC CGCACCTGGC TGCAGCACGC CACCCCTGTG ACCCTGGGCA TGAAACTGGC CGGTGTGTTG GGCGCCTTGA CCCGCCACCG TCAGCGCCTG CGGGAACTTC GTCCGCGCCT GCTGGTGCTG CAGTTCGGCG GTGCCTCGGG CAGCCTGGCG GCACTGGGCA GCAAGGCGAT GCCGGTGGCT GAAGCGCTGG CCGAGCAACT CAAGCTGACC CTGCCCGAGC AACCCTGGCA CACCCAGCGC GACCGCCTGG TGGAATTTGC CTCGGTACTG GGCCTGGTTG CCGGCAGCCT GGGCAAGTTC GGCCGCGATA TCAGCCTGCT GATGCAAACC GAGGCGGAGG AGGTGTTCGA ACCTTCCGCA CCAGGCAAGG GCGGTTCTTC GACCATGCCG CACAAGCGCA ACCCGGTCGG TGCCGCGGTG TTGATCGGTG CTGCCACTCG CGTGCCGGGC CTGCTGTCGA CGCTGTTCGC CGCCATGCCC CAGGAGCACG AGCGCAGCCT CGGCCTGTGG CACGCCGAAT GGGAAACCCT GCCGGATATC TGCTGCCTGG TCTCTGGCGC CCTGCGCCAG GCCCAGGTGA TTGCCGAGGG CATGGAGGTG GATGCCGTGC GCATGCGCCA CAACCTCGAT CTGACCCAAG GCCTGGTGCT GGCCGAAGCG GTGAGCATCG TCCTCGCCCA ACGCCTGGGC CGTGACCGTG CTCACCACCT GTTGGAACAA TGCTGCCAGC GCGCGGTGGC TGAACAGCGC CACCTGCGTG CTGTGCTGGG TGACGAGCCG CAGGTCAGCG CCGAGCTGTC TGGCGAAGAA CTCGATCGCC TGCTCGACCC TGCCCATTAC CTGGGCCAGG CCCGCGTCTG GGTGGCGCGC GCCGTATCCG AACATCAACA TTTCACTGCC TGA
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Protein sequence | MSNQLFDAYF TAPAMREVFS DRGRLQGMLD FEAALAHAEA AAGLVPHSAV AAIEAACQAE RYDVGALANA IATAGNSAIP LVKALGKVIA TGVPEAERYV HLGATSQDAM DTGLVLQLRD ALDLIEADLG KLADTLSQQA LKHADTPLVG RTWLQHATPV TLGMKLAGVL GALTRHRQRL RELRPRLLVL QFGGASGSLA ALGSKAMPVA EALAEQLKLT LPEQPWHTQR DRLVEFASVL GLVAGSLGKF GRDISLLMQT EAEEVFEPSA PGKGGSSTMP HKRNPVGAAV LIGAATRVPG LLSTLFAAMP QEHERSLGLW HAEWETLPDI CCLVSGALRQ AQVIAEGMEV DAVRMRHNLD LTQGLVLAEA VSIVLAQRLG RDRAHHLLEQ CCQRAVAEQR HLRAVLGDEP QVSAELSGEE LDRLLDPAHY LGQARVWVAR AVSEHQHFTA
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