| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4374 |
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| Symbol | rnc |
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| ID | 5872181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4898459 |
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| End bp | 4899148 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549508 |
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| Product | ribonuclease III |
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| Protein accession | YP_001670598 |
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| Protein GI | 167035367 |
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| COG category | [K] Transcription |
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| COG ID | [COG0571] dsRNA-specific ribonuclease |
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| TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.201435 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGCTT CCCTTGCCCG TCTGGAGCGA AAGCTCGGTT ACACCTTCAA GAACCAGGAC
CAGATGCTCC TGGCGCTGAC CCATCGCAGT TACGCCGGGC GCAACAATGA GCGCCTGGAG
TTTCTCGGCG ATGCCATTCT CAACTTCGTC GCCGGCGAAG CGCTGTTCGA GCGCTTCCCG
CAGGCCCGCG AAGGCCAGCT TTCGCGCCTG CGCGCGCGCT TGGTCAAGGG CGAGACCCTG
GCCCGCCTGG CCCGTGGTTT CGACCTGGGC GAATACCTGC GCCTGGGTTC GGGTGAGCTC
AAAAGTGGCG GTTTCCGTCG CGAGTCGATC CTGGCCGACG CCCTGGAGGC ACTGATTGGT
GCCATCTACC TGGACGCTGA CATGGACACT GCCCGGGAAC GCGTCCTGGC CTGGCTGGCC
GACGAGTTCG AGGGCCTGAC CCTGGTCGAC ACCAACAAGG ACCCGAAAAC CCGCCTGCAA
GAGTTCCTGC AGTCGCGCAG CTGTGAGCTG CCGCGTTACG AAGTAGTGGA TATCCAGGGT
GAACCGCACT GCCGCACCTT CTTCGTCGAA TGCGAAGTGG TACTGCTGAA CAACAAGAGC
CGTGGTCAGG GCGTTAGCCG GCGTATCGCC GAGCAAGTCG CCGCCGCGTC TGCACTGATC
GCCCTGGGCG TGGAGAATGG CAATGACTGA
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| Protein sequence | MTASLARLER KLGYTFKNQD QMLLALTHRS YAGRNNERLE FLGDAILNFV AGEALFERFP
QAREGQLSRL RARLVKGETL ARLARGFDLG EYLRLGSGEL KSGGFRRESI LADALEALIG
AIYLDADMDT ARERVLAWLA DEFEGLTLVD TNKDPKTRLQ EFLQSRSCEL PRYEVVDIQG
EPHCRTFFVE CEVVLLNNKS RGQGVSRRIA EQVAAASALI ALGVENGND
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