| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4360 |
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| Symbol | |
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| ID | 5872167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4882422 |
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| End bp | 4883756 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549494 |
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| Product | carbohydrate-selective porin OprB |
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| Protein accession | YP_001670584 |
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| Protein GI | 167035353 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.081551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.195321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCAAC TGCCCAAAAC CTGTTACATC GGCCTTGCCC TTGGCGCCTT GGCGACACCC
GCCAGCGCCA GCGAAATGTT CGCCAGCGAC TCCCCGTGGA TGCTCGGAGA CTGGGGCGGC
ACCCGTAGCC AATTACTGGA ACAGGGCTAC GACTTTACCC TCGGCTATAC CGGCGAGATG
GGCAGCAACC TGCACGGCGG TTACGACCAC GACCGTACCG CGCGCTACAG CGACCAGTTC
ACCTTTGGCA GCCACCTGGA CCTGGAAAAG ATCCTCGGCT GGCACGCCAC CGAATTCCAG
CTGACCGTCA CCGAACGCCA CGGCGACAAC ATCAGCAACG ACCGCATCAA CGACCCGCGC
GTTGGCGGTT TCACCTCGGC CCAGGAAGTC TGGGGCCGCG GTGAAACCTG GCGGCTGACG
CAGATGTGGA TCAAGCAGAA GTACTTCGAT GGCGCGCTGG ATGTGAAATT CGGCCGCTTC
GGTGAAGGCG AGGACTTCAA CAGCTTCCCT TGCGACTTCC AGAACCTGGC CTTCTGCGGC
TCGCAGGTGG GCAACTGGGT GGGTGGCATC TGGTACAACT GGCCAGTCAG CCAGTGGGCC
TTGCGCGTGC GCTACAACCT CACCCCTGAG CTGTACGCTC AGGTCGGCGT ATTCGAGCAA
AACCCCTCCA ACCTCGAATC GGGCAATGGC TTCAAGCTCA GCGGCAGCGG CACCCAGGGC
GCGGTAATGC CGGTCGAACT GGTATGGAGC CCGCGTATCC AAGGCCTGAA AGGGGAATAT
CGCGCCGGCT ACTACTACAG TAATGCCAAG GCACAAGATG TTCTCAAGGA CAGCAACGGT
CAGCCGGCAG CCCTCAGCGG CGCCGCCTAC CGCAGCAGCT CGAGCAAGCA CGGCTTGTGG
CTCGGCGCCC AGCAGCAGGT GACCTCGCTG GCGTCCGACC AGTCGCGTGG GCTGAGCCTG
TTCGCCAACG CCACGGTGCA CGACAAGAAG ACCAATGCCA TCGACAACTA TGTACAGACA
GGGCTGGTAT ACAAAGGGCC CTTCGACGCC CGCGCCAAGG ACGACATCGG TTTCGCCCTG
GCCCGTGTGC ACGTCAACCC TGCCTACCGC AAGAACGCCC GCCTGGCCAA CCAGGCTGCC
GGCCTCGACG ACTACGACAA CCCCGGCTTC CTGCCCGTGC AGGACACCGA ATACAGCGCC
GAGCTGTATT ACGGCATCCA TTTGGCCGAC TGGCTCACGG TACGCCCCAA CCTGCAGTAC
ATCCGCCACC CGGGCGGGGT GTCGCAGGTC GATGGCGCCC TGATCGGCGG CCTGAAGATC
CAAAGCAGTT TCTAA
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| Protein sequence | MFQLPKTCYI GLALGALATP ASASEMFASD SPWMLGDWGG TRSQLLEQGY DFTLGYTGEM
GSNLHGGYDH DRTARYSDQF TFGSHLDLEK ILGWHATEFQ LTVTERHGDN ISNDRINDPR
VGGFTSAQEV WGRGETWRLT QMWIKQKYFD GALDVKFGRF GEGEDFNSFP CDFQNLAFCG
SQVGNWVGGI WYNWPVSQWA LRVRYNLTPE LYAQVGVFEQ NPSNLESGNG FKLSGSGTQG
AVMPVELVWS PRIQGLKGEY RAGYYYSNAK AQDVLKDSNG QPAALSGAAY RSSSSKHGLW
LGAQQQVTSL ASDQSRGLSL FANATVHDKK TNAIDNYVQT GLVYKGPFDA RAKDDIGFAL
ARVHVNPAYR KNARLANQAA GLDDYDNPGF LPVQDTEYSA ELYYGIHLAD WLTVRPNLQY
IRHPGGVSQV DGALIGGLKI QSSF
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