| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4353 |
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| Symbol | |
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| ID | 5872160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | - |
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| Start bp | 4872697 |
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| End bp | 4874115 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549487 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001670577 |
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| Protein GI | 167035346 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.578199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGTCG GCAACCACTC TGCCCACGGC CAGGCCACTG AAGGCGGCCC GCTCAAGCGC
GAACTGGGCG AACGGCACAT CCGCCTGATG GCGCTGGGCG CCTGTATCGG TGTCGGTCTT
TTCCTCGGTT CGGCCAAGGC TATCGAAATG GCCGGCCCAG CCATCATGTT CTCCTACATC
ATCGGCGGCC TGGCCATCCT GGTGATCATG CGCGCCCTGG GTGAAATGGC CGTGCACAAC
CCTGTCGCCG GCTCCTTCAG CCGTTATGCA CAGGACTACC TCGGCCCGTT GGCGGGCTTC
CTCACCGGTT GGAACTACTG GTTCCTGTGG TTGGTGACCT GCGTTGCCGA AATCACCGCG
GTGGCCATCT ACATGGGCAT CTGGTTCCCC GACGTACCAC GCTGGATCTG GGCCCTGGCG
GCGCTAGGCA GCATGGGCGC GGTCAACCTG GTGGCGGTGA AGGCCTTCGG TGAATTCGAG
TTCTGGTTCG CCCTGATCAA GATCGTCACG ATCATTGCCA TGGTCATCGG CGGCATTGGC
GTCATCGCCT TCGGTTTCGG CAACGACGGT GTGGCCGTCG GTATCTCCAA TCTGTGGAGC
AATGGCGGCT TCATGCCCAA TGGCGTGACT GGCGTGCTGA TGTCGTTGCA GATGGTGATG
TTCGCCTACC TGGGCGTGGA AATGATCGGC TTGACCGCTG GTGAAGCACG CAACCCGCAA
AAGACCATTC CGCAGGCCAT CGGCTCGGTG TTCTGGCGCA TCCTGCTGTT CTACGTCGGT
GCGTTGTTCG TGATCCTGTC GATCTACCCA TGGAACGAAA TCGGCAGCCA AGGCAGCCCG
TTCGTCATGA CCTTCGAGCG CCTCGGGATC AAGACCGCTG CCGGCATCAT CAACTTCGTG
GTCATCACTG CGGCGCTGTC GTCGTGCAAC GGCGGTATCT TCAGTACCGG GCGCATGCTC
TACAGCCTGG CGCAGAATGG CCAGGCCCCG GCGGCCTTCG CCCGTACGTC GAAGAATGGC
GTGCCACGTA ATGCCCTGCT GCTGTCGATC GGCGCGTTGC TGCTGGGCGT GCTGGCCAAC
TACCTGGTGC CGGAAAAGGT CTTCGTCTGG GTGACTTCGA TCGCCACCTT CGGTGCGATC
TGGACCTGGG TGATGATCCT GCTGGCACAG CTGAAGTTCC GTGCTGGCCT GACTACCGCC
GAACGCAAGG CGCTGAAGTA CCGCATGTGG CTGTGGCCGC TGAGCTCGTA CCTGGCACTG
GCCTTCCTGG TGCTGGTGGT CGGCTTGATG GCCTACTTCG AGGATACCCG TGTGGCCCTG
TACATCGGCC CGGCGTTCCT GGTGCTGCTG ACGGTGTTGT ATTACGCGTT CCGTCTGGCA
CCCAAAGAAG TACAAGGTGT AGCGAGTACC GCTTCCTGA
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| Protein sequence | MPVGNHSAHG QATEGGPLKR ELGERHIRLM ALGACIGVGL FLGSAKAIEM AGPAIMFSYI
IGGLAILVIM RALGEMAVHN PVAGSFSRYA QDYLGPLAGF LTGWNYWFLW LVTCVAEITA
VAIYMGIWFP DVPRWIWALA ALGSMGAVNL VAVKAFGEFE FWFALIKIVT IIAMVIGGIG
VIAFGFGNDG VAVGISNLWS NGGFMPNGVT GVLMSLQMVM FAYLGVEMIG LTAGEARNPQ
KTIPQAIGSV FWRILLFYVG ALFVILSIYP WNEIGSQGSP FVMTFERLGI KTAAGIINFV
VITAALSSCN GGIFSTGRML YSLAQNGQAP AAFARTSKNG VPRNALLLSI GALLLGVLAN
YLVPEKVFVW VTSIATFGAI WTWVMILLAQ LKFRAGLTTA ERKALKYRMW LWPLSSYLAL
AFLVLVVGLM AYFEDTRVAL YIGPAFLVLL TVLYYAFRLA PKEVQGVAST AS
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