Gene PputGB1_4325 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4325 
Symbol 
ID5872132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4836850 
End bp4837776 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content63% 
IMG OID641549459 
ProductOmpA/MotB domain-containing protein 
Protein accessionYP_001670549 
Protein GI167035318 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCAGC GTTACCTAGC CCTGTTGACC CTGTTCGCCA GCCTGCCGGC CGGCGCACTG 
ACTTTCCAGA CGCGCATGGA GAACATCGCC TGGAAGGTCG AGGGTGATCA GTTCGAATGC
CGCCTGATCC AGCCGATCGA AGGTTTCGGC AGCGGAGAGT TCGTGCGCCG GGCAGGTGAG
CAGCCAGTGT TCCAGCTGCG TTCGGACAGC AACGTACTGG GGGCAGGTAC CGCCAGCCTG
CTGGCGGCGG CGGCGCCATG GCAGCCTGGA CGTGGTGATA TCAACCTGGG CAGCGTGCGC
ATGGCCCGTA CCGGTGTGCT GTTCAGTTCG TCCCAGGGCC AGGCCAGCCG CCTGATAAAC
GGTCTTCTCG ACGGGCGCAG CACAGTGGTG CGCAATTACG CCGGTGAGGC CGGCAGGCCA
ATGGAGGTGC GCGTGCTGCC GGTCAGCTTC GCCAAGGCCT ACAGCGACTA CCAAGCCTGT
GCCGGCAAGT TGCTGCCGAT GAACTTCGAC CAGGTTCGCC AGACCCAGGT AGGCTTCCCG
GGGGGCGGCA CCGAGCTGGA TGCGTCGGCG CGTGCACGGC TGGATGTGAT CCTGGATTAC
ATGAAAGCCG ACCCGACGGT GAACCACATC GAGCTTGACG GCCACTCTGA CAACAGTGGC
AACCGGCTGA CAAACCGTGA CCTGTCACGC CGGCGCGCGC TCGCGGTGGC CGATTACTTC
AAAGCCCATG GCGTGGCGGA AGAACAGATC ATCGTGCGCT TCCATGGTGA GCAATACCCA
TTGGTGAAGA ACAACAGTGC TGCCAACCGG GCGCGTAATC GACGGGTGAA TATCGAGCTG
GATCGGGTTA CGGTAGTTGT GAAACCGGTG GAGAAACCTG CCGAAAAAGC CCCTGAACCA
ACTGCATCAG CGCCAGCTGC CAAGTAA
 
Protein sequence
MRQRYLALLT LFASLPAGAL TFQTRMENIA WKVEGDQFEC RLIQPIEGFG SGEFVRRAGE 
QPVFQLRSDS NVLGAGTASL LAAAAPWQPG RGDINLGSVR MARTGVLFSS SQGQASRLIN
GLLDGRSTVV RNYAGEAGRP MEVRVLPVSF AKAYSDYQAC AGKLLPMNFD QVRQTQVGFP
GGGTELDASA RARLDVILDY MKADPTVNHI ELDGHSDNSG NRLTNRDLSR RRALAVADYF
KAHGVAEEQI IVRFHGEQYP LVKNNSAANR ARNRRVNIEL DRVTVVVKPV EKPAEKAPEP
TASAPAAK