Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputGB1_4325 |
Symbol | |
ID | 5872132 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida GB-1 |
Kingdom | Bacteria |
Replicon accession | NC_010322 |
Strand | - |
Start bp | 4836850 |
End bp | 4837776 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641549459 |
Product | OmpA/MotB domain-containing protein |
Protein accession | YP_001670549 |
Protein GI | 167035318 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 57 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGCCAGC GTTACCTAGC CCTGTTGACC CTGTTCGCCA GCCTGCCGGC CGGCGCACTG ACTTTCCAGA CGCGCATGGA GAACATCGCC TGGAAGGTCG AGGGTGATCA GTTCGAATGC CGCCTGATCC AGCCGATCGA AGGTTTCGGC AGCGGAGAGT TCGTGCGCCG GGCAGGTGAG CAGCCAGTGT TCCAGCTGCG TTCGGACAGC AACGTACTGG GGGCAGGTAC CGCCAGCCTG CTGGCGGCGG CGGCGCCATG GCAGCCTGGA CGTGGTGATA TCAACCTGGG CAGCGTGCGC ATGGCCCGTA CCGGTGTGCT GTTCAGTTCG TCCCAGGGCC AGGCCAGCCG CCTGATAAAC GGTCTTCTCG ACGGGCGCAG CACAGTGGTG CGCAATTACG CCGGTGAGGC CGGCAGGCCA ATGGAGGTGC GCGTGCTGCC GGTCAGCTTC GCCAAGGCCT ACAGCGACTA CCAAGCCTGT GCCGGCAAGT TGCTGCCGAT GAACTTCGAC CAGGTTCGCC AGACCCAGGT AGGCTTCCCG GGGGGCGGCA CCGAGCTGGA TGCGTCGGCG CGTGCACGGC TGGATGTGAT CCTGGATTAC ATGAAAGCCG ACCCGACGGT GAACCACATC GAGCTTGACG GCCACTCTGA CAACAGTGGC AACCGGCTGA CAAACCGTGA CCTGTCACGC CGGCGCGCGC TCGCGGTGGC CGATTACTTC AAAGCCCATG GCGTGGCGGA AGAACAGATC ATCGTGCGCT TCCATGGTGA GCAATACCCA TTGGTGAAGA ACAACAGTGC TGCCAACCGG GCGCGTAATC GACGGGTGAA TATCGAGCTG GATCGGGTTA CGGTAGTTGT GAAACCGGTG GAGAAACCTG CCGAAAAAGC CCCTGAACCA ACTGCATCAG CGCCAGCTGC CAAGTAA
|
Protein sequence | MRQRYLALLT LFASLPAGAL TFQTRMENIA WKVEGDQFEC RLIQPIEGFG SGEFVRRAGE QPVFQLRSDS NVLGAGTASL LAAAAPWQPG RGDINLGSVR MARTGVLFSS SQGQASRLIN GLLDGRSTVV RNYAGEAGRP MEVRVLPVSF AKAYSDYQAC AGKLLPMNFD QVRQTQVGFP GGGTELDASA RARLDVILDY MKADPTVNHI ELDGHSDNSG NRLTNRDLSR RRALAVADYF KAHGVAEEQI IVRFHGEQYP LVKNNSAANR ARNRRVNIEL DRVTVVVKPV EKPAEKAPEP TASAPAAK
|
| |