| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4317 |
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| Symbol | |
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| ID | 5872124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4830866 |
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| End bp | 4831840 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641549451 |
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| Product | electron transport complex, RnfABCDGE type, D subunit |
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| Protein accession | YP_001670541 |
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| Protein GI | 167035310 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4658] Predicted NADH:ubiquinone oxidoreductase, subunit RnfD |
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| TIGRFAM ID | [TIGR01946] electron transport complex, RnfABCDGE type, D subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAACA GTCCCGACCC GCGGCTACGT ACCAGCATGG GCCTGGTCTT GCTGGCCTGC
TTGCCCGGCC TTCTGACGCT GTTATGGCTG CATGGCTGGG GCATGCTGCT GAACCTGTTG
CTGTGTGCCA GTGCGGCACT CCTGTGCGAA GCGGCGCTGC TGGCGTTGCG CGGCCAATCA
CCCAGCACGG CGCTAAACGA TGGCAGTGCA CTGGTGACCG CCGTGCTACT GGCGGCCGCC
CTGCCCACGC TCGCCCCGTG GTGGTTGCCG GTGATCGCGG CAAGTGCTGC CATCGGCATC
GGCAAGCAGG CCTTTGGTGG GGTTGGGCGA AATCTGTTCA ACCCGGCCAT GGTCGGATAT
GCCTTTGTGC TCCTGAGTTT TCCGTTGCAG ATGAACCATT GGCCAGGGCC GGCCCCGGGC
TTGCTCGACA GCCTGCAGCA AGTGTTCGCC GGGGGCGATC AGGTCGATGC CTGGGCCCGG
CCAACCCTGC TCGACGGCTT GCGCCACAAC CGCAGCCTGA CCATCGACGA GCTGTTTGCC
AGCCATCCGG GCTTCGGCAG CATTGGCGGT GCAGGAAGCG AATGGGTCAA CCTGGCATTC
CTGCTCGGTG GCCTGTTCTT GTTGCAGCGC AAGGTAATCA GCTGGCATGC GCCGGCGGGC
TTGCTGGCAG GGCTGTTCGT ATTCAGTTTA TTGGGCTGGA ACGGTTCGGG ATCGGACTCC
AATGGTTCGC CCTTGCTGCA CCTGTTCTCC GGTTCGACCA TGCTGGCAGC CTTCTTCATT
GCCACCGAGC CAGTTTCCGG CCCCAGGAAC GAATGGGCCA GGCTGTGCTT CGGCCTGGGA
ACAGGGCTGC TCATCTACCT GATTCGTACC TGGGGCAGCT ACCCGGATGG CACTGCGTTC
GCCATCTTGC TGATGAACCT TGTGGCGCCG ACGCTCGAGC GCCTGGCCAC GCAGCGCCAG
CAGGCTACCC GATGA
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| Protein sequence | MINSPDPRLR TSMGLVLLAC LPGLLTLLWL HGWGMLLNLL LCASAALLCE AALLALRGQS
PSTALNDGSA LVTAVLLAAA LPTLAPWWLP VIAASAAIGI GKQAFGGVGR NLFNPAMVGY
AFVLLSFPLQ MNHWPGPAPG LLDSLQQVFA GGDQVDAWAR PTLLDGLRHN RSLTIDELFA
SHPGFGSIGG AGSEWVNLAF LLGGLFLLQR KVISWHAPAG LLAGLFVFSL LGWNGSGSDS
NGSPLLHLFS GSTMLAAFFI ATEPVSGPRN EWARLCFGLG TGLLIYLIRT WGSYPDGTAF
AILLMNLVAP TLERLATQRQ QATR
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