Gene PputGB1_4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputGB1_4290 
SymboldinG 
ID5872097 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida GB-1 
KingdomBacteria 
Replicon accessionNC_010322 
Strand
Start bp4803258 
End bp4805402 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content64% 
IMG OID641549424 
ProductATP-dependent DNA helicase DinG 
Protein accessionYP_001670514 
Protein GI167035283 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1199] Rad3-related DNA helicases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCA ACGAACTCAA AGCCACTATT CAGGGCGCCT ATTCGCGTTT TCTCGAAGCC 
AAGAGCCTCA AGCCGCGCTA CGGCCAGCGT CTGATGATCG CCGAAGTGGC CAAGGTGCTT
GGCGACATTG CCTGCGACGA TGAAGGCCGG CGTGCCGGTG AGCCTGCCGT GGTGGCCGTG
GAAGCGGGCA CCGGTACCGG CAAGACCGTG GCCTACAGCC TGGCCGCCAT TCCGGCCGCC
AAGGCCGCCG GCAAGCGCCT GGTGATAGCC ACTGCCACCG TGGCCCTGCA GGAGCAGATC
GTCTTCAAGG ACCTGCCCGA CCTGATGCGC AATAGCGGGC TCAACTTCAG CTTTGCCCTG
GCCAAGGGCC GTGGCCGCTA CCTGTGCCTG TCCAAGCTCG ACATCCTGCT GCAGGAAGGC
CATGCCCAGT CGGCCACCGC CCAGTTGTTC GAAGAAGAAG GCTTCCGTAT CGAAGTCGAC
GAACGCAGCC AGAAGCTATT CAACAGCATG ATCGAGAAGC TCGCCGGCAA CCGCTGGGAC
GGTGACCGTG ACAGTTGGCC CGAGGCCCTG GAAGACCAGG ACTGGGCACG CCTGACCACC
GACCACAGCC AGTGCACGGG CCGTCATTGC CCGAACTTCC AGCAGTGCGT GTTCTACAAG
GCCCGCGAAG GCATGGGCAA GGTCGACGTG ATCGTCACCA ACCACGACAT GGTCCTGGCC
GACCTGGCCC TGGGCGGCGG TGCGGTATTG CCCGACCCGC GCGATACCAT GTACGTGTTC
GACGAAGGCC ACCACCTGCC AGACAAGGCC ATCGGCCACT TCGCCCATTA TTCGCGGCTG
CGTTCCACGG GCGACTGGCT TGAGCAGACG GCCAAGAACC TGACCAAGCT TCTGGCCCAG
CACCCGCTGC CCGGTGACCT GGGCAAATAC ATCGAGCAGG TGCCGGAGCT GGCGCGGGAA
GTGCGCACCC AACAACAGTT CATGTTCACG CTGTGCGAAC AGGTGGCCGA CTTCCGCCCC
AGCGAGGACA CCGAAGGCCG TGAGCGCCCG CGCTACCGTT TTGAGGGTGG GGTGGTGCCA
GAACAGATTC GCGAGGTGGG CATCGAGTTG AAGAAGGGCT TCGCCCGCCT CAACGACCTG
TTCACCCGCC TGGCCGACCT GCTCAAGGAA GGGATGGACG GTGAGGTGAG CATCGGCATT
GCCAGCCACC AGGCCGAAGA ATGGTATCCG CTGTTCGGCA GCCTGGTCAC CCGTGCCCAG
GGCAACTGGG AACTGTGGAC GGCCTTTACC GCCGAAGACC CGGAAGACAG CCCGCCCATG
GCCCGTTGGC TGACGTTGGC CGAAAGCGGT GCGATGTTCG ACATCGAAGT CAACGCCAGC
CCCATTCTTG CTGCCGAAAT GCTCCGCCGC AGCCTGTGGA GCGTTGCCCA TGGCGCCTTG
GTAACGTCGG CGACGTTGAC CGCGCTCGGC AAATTCGATC GCTTCCGCAT GCGCTCGGGC
TTGCCGCGCG ATGCCGTCAC CTGTGTGGTC CCCAGCCCGT TCGTGCATGG CGATGCCGGC
CTGTTGCGGG TCCCGGACTT GCAGGCCGAC CCACGCGATG CGGCGGCGCA CACGGCGGCG
ATCATCCGCG AACTGCCGAA CATCGTCGAA GATGCCCGTG GCGCGCTGGT GCTGTTCTCG
TCACGCAAGC AGATGCAGGA TGTGTTCGAC GGCCTGGACC GCGACTGGCG TAAGCTGGTG
CTGATCCAGG GCAACCTGTC CAAGCAGGAA ACCCTGAACA AGCACAAGGC ACGGGTCGAC
GATGGCCAGC ACAGCGTGTT GTTCGGCCTG GCCAGCTTTG CCGAAGGTGT CGACCTGCCG
GGTGCGTACT GCGAGCACGT GGTCATCGCC AAAATTCCCT TCTCCGTGCC CGACGACCCG
GTGGAGGCTG CCTTGTCGGA GTGGATCGAG GCCCGCGGCG GCAACCCGTT CATGGAAATT
GCCGTGCCGG ACGCGTCGCT CAAGTTGATC CAGGCCTGTG GCCGCCTGCT GCGTACCGAG
CAGGATCGCG GCGTCATCAC CTTGCTCGAT CGGCGTCTGG TCACCCAGCG TTACGGCAAG
GCTATTCTCA ATGCGCTGCC GCCGTTCCGG CGGGAGATTT CCTGA
 
Protein sequence
MISNELKATI QGAYSRFLEA KSLKPRYGQR LMIAEVAKVL GDIACDDEGR RAGEPAVVAV 
EAGTGTGKTV AYSLAAIPAA KAAGKRLVIA TATVALQEQI VFKDLPDLMR NSGLNFSFAL
AKGRGRYLCL SKLDILLQEG HAQSATAQLF EEEGFRIEVD ERSQKLFNSM IEKLAGNRWD
GDRDSWPEAL EDQDWARLTT DHSQCTGRHC PNFQQCVFYK AREGMGKVDV IVTNHDMVLA
DLALGGGAVL PDPRDTMYVF DEGHHLPDKA IGHFAHYSRL RSTGDWLEQT AKNLTKLLAQ
HPLPGDLGKY IEQVPELARE VRTQQQFMFT LCEQVADFRP SEDTEGRERP RYRFEGGVVP
EQIREVGIEL KKGFARLNDL FTRLADLLKE GMDGEVSIGI ASHQAEEWYP LFGSLVTRAQ
GNWELWTAFT AEDPEDSPPM ARWLTLAESG AMFDIEVNAS PILAAEMLRR SLWSVAHGAL
VTSATLTALG KFDRFRMRSG LPRDAVTCVV PSPFVHGDAG LLRVPDLQAD PRDAAAHTAA
IIRELPNIVE DARGALVLFS SRKQMQDVFD GLDRDWRKLV LIQGNLSKQE TLNKHKARVD
DGQHSVLFGL ASFAEGVDLP GAYCEHVVIA KIPFSVPDDP VEAALSEWIE ARGGNPFMEI
AVPDASLKLI QACGRLLRTE QDRGVITLLD RRLVTQRYGK AILNALPPFR REIS