| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4278 |
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| Symbol | livM |
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| ID | 5872085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4790230 |
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| End bp | 4791486 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641549412 |
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| Product | leucine/isoleucine/valine transporter permease subunit |
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| Protein accession | YP_001670502 |
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| Protein GI | 167035271 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.264378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAA ATCTCAAACA GGCGTTCTTC AGCGCCTTGC TGGTATGGGC CGTGGCCTTC
CCGGTACTGG GCCTGAAACT GAGCATCGAC GGCATCAGCC TGGCCGTGCA CAGCCAGGGC
TCGTTCACCA TCAGCATCAT CGCCGTGTGT TCGGTGCTGA TGTTCCTGCG TGTGCTGTTC
GACAAGCAGT GGAGCTCGGT GATGGGCCGC CGTTCGGATC GCAAGCTGAT CCCGCCGGCC
GTCAGCAACT ACCTGACCCT GCCCAAGACC CAGCGCTATG TGATCATCGG GTTGATCGTG
GCGGCACTGG TGTGGCCGTT CTTCGGCTCG CGCGGTGCGG TCGACATTGC CACGCTGATC
CTGATCTACG TGTTGCTGGG CCTTGGCCTG AACATCGTGG TCGGCCTGGC GGGCCTGCTC
GACCTTGGCT ATGTCGGCTT CTACGCCGTC GGCGCCTACA GCTACGCCAT GCTCTCGCAC
TACCTGGGCT GGAGCTTCTG GGTGTGCCTG CCGATTGCCG GCCTGATGGC CGCCACCTTC
GGCTTCCTGC TCGGCTTCCC GGTACTGCGC CTGCGGGGTG ACTACCTGGC GATCGTGACC
CTCGGCTTCG GCGAGATCAT CCGCCTGTTC CTGCGTAACC TCACCGACTG GACCGGCGGC
CCCAACGGCA TCAGCAACAT CCCCAAGCCG GAGTTCTTCG GCCTGACCTT CGAACGCCGC
GCCGCCGAGG GCATGCAGAC CTTCCACGAG TTCTTCGGCC TGGAATACAA CTCGATCAAC
AAGGTCATCT TCCTCTACCT GGTGGCCCTG CTGCTGGCGC TGCTGGCGCT GTTCGTCATC
AACCGCCTGC TGCGCATGCC GATCGGCCGC GCCTGGGAAG CCCTGCGCGA AGACGAGATC
GCCTGCCGCG CACTGGGCCT CAACCCGACC GTGATCAAAC TCTCGGCGTT CACCCTGGGT
GCCTGCTTCG CCGGTTTCGC CGGTAGCTTC TTCGCCGCGC GCCAAGGCCT GGTGACGCCG
GAGTCGTTCA CCTTCATCGA GTCGGCGATC ATCCTCGCCA TCGTCGTGCT TGGCGGCATG
GGCTCACAAC TGGGCGTGAT TCTCGCGGCC ATCGTGATGA TCCTGCTGCC CGAGCTGATG
CGTGAGTTCA GCGAATACCG GATGCTGATG TTCGGTGCGC TGATGGTGTT GATGATGATC
TGGCGTCCGC AAGGCCTGCT GCCTATGCAA CGTCCACACA TGGAGCTGCG TCGATGA
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| Protein sequence | MNKNLKQAFF SALLVWAVAF PVLGLKLSID GISLAVHSQG SFTISIIAVC SVLMFLRVLF
DKQWSSVMGR RSDRKLIPPA VSNYLTLPKT QRYVIIGLIV AALVWPFFGS RGAVDIATLI
LIYVLLGLGL NIVVGLAGLL DLGYVGFYAV GAYSYAMLSH YLGWSFWVCL PIAGLMAATF
GFLLGFPVLR LRGDYLAIVT LGFGEIIRLF LRNLTDWTGG PNGISNIPKP EFFGLTFERR
AAEGMQTFHE FFGLEYNSIN KVIFLYLVAL LLALLALFVI NRLLRMPIGR AWEALREDEI
ACRALGLNPT VIKLSAFTLG ACFAGFAGSF FAARQGLVTP ESFTFIESAI ILAIVVLGGM
GSQLGVILAA IVMILLPELM REFSEYRMLM FGALMVLMMI WRPQGLLPMQ RPHMELRR
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