| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_4264 |
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| Symbol | |
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| ID | 5872071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 4775194 |
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| End bp | 4775952 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641549398 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001670488 |
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| Protein GI | 167035257 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.281349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCA AAATTGCCCT GATCACCGGC GCCAGTCGCG GCCTCGGCCG CAACGCTGCC
GAGCACCTGG CCGCACGCGG CATCGATGTC ATCGGCACCT ACAACAGCAA GGCAGATGAA
GCGCACGCCG TGGCGGCCCG GCTGGAGCAG GCCGGAGTCA AAGCGGCCAT GCTGCAACTG
GACGTCAGCG ACAGCAGCAG CTTTGCCGGT TTCGCCGAGC GCCTGGGCAC GACCCTGCAA
CAACACTTTG GCCGCGAGCG TTTCGACTTT CTGGTGAACA ATGCAGGGAT TGGGTTGAAC
GTGCCGTACA TCGAAACCAC CGAGGCGCAA TTCGACCAGT TGTTGAACAT TCAGCTCAAA
GGGCCGTTTT TCCTCACCCA GCGCCTGCTA CCGCTACTGG CGGACAATGG CCGCATCGTC
AACATTTCCA CCGGCCTGGC GCGCTTTGCG TTGCCGGGGT ATGCCGCCTA TGCCGCGATG
AAAGGCGCAA TGGAGGTGCT GACCCGCTAC CAGGCCAAGG AACTGGGCGC GCGAGGCATT
CGCGTGAACA TTCTGGCGCC GGGTGCGATC GAGACCGATT TTGGTGGCGG CGTAGTGCGG
GACAACCCGC AGGTGAATGA GTACATCGCT GGCAACACGG CATTGGGGCG GGTGGGGTTG
CCGGATGATA TCGGGGCAGC GATTGCGCTG CTGCTGGAAG ACGGCAATGG CTGGATTACC
GGGCAGCGGC TGGAGGTATC GGGCGGGATG TTTCTCTGA
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| Protein sequence | MIRKIALITG ASRGLGRNAA EHLAARGIDV IGTYNSKADE AHAVAARLEQ AGVKAAMLQL
DVSDSSSFAG FAERLGTTLQ QHFGRERFDF LVNNAGIGLN VPYIETTEAQ FDQLLNIQLK
GPFFLTQRLL PLLADNGRIV NISTGLARFA LPGYAAYAAM KGAMEVLTRY QAKELGARGI
RVNILAPGAI ETDFGGGVVR DNPQVNEYIA GNTALGRVGL PDDIGAAIAL LLEDGNGWIT
GQRLEVSGGM FL
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